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Model: PhantomAjusshi/phi3-auditor-merged
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---
license: mit
language:
- en
base_model:
- microsoft/Phi-3-mini-4k-instruct
pipeline_tag: text-generation
library_name: transformers
tags:
- phi3
- lora
- peft
- clinical-ai
- model-audit
- text-generation
- fine-tuned
- healthcare
- safetensors
---
# 🏥 phi3-auditor-merged
**Phi-3-mini fine-tuned for clinical AI model auditing.**
This model takes a JSON object of ML performance metrics (AUC, ECE, drift, label shift, etc.) and returns a structured health classification label plus a detailed explanation — helping teams audit deployed clinical models for drift, calibration failure, class imbalance, and other issues.
---
## Model Details
| Property | Value |
|---|---|
| **Base Model** | [microsoft/Phi-3-mini-4k-instruct](https://huggingface.co/microsoft/Phi-3-mini-4k-instruct) |
| **Fine-tuning Method** | LoRA (Low-Rank Adaptation) via PEFT |
| **Training Precision** | 8-bit quantized (BitsAndBytesConfig) |
| **Merged Precision** | FP16 (float16 safetensors) |
| **Parameters** | ~3.8B |
| **Model Size** | 7.65 GB (2 safetensor shards) |
| **LoRA Rank (r)** | 16 |
| **LoRA Alpha** | 32 |
| **LoRA Dropout** | 0.05 |
| **Target Modules** | `q_proj`, `k_proj`, `v_proj`, `o_proj` |
| **Task Type** | Causal Language Modeling |
| **PEFT Version** | 0.18.0 |
| **Training Epochs** | 3 |
| **Final Loss** | ~0.41 |
---
## Intended Use
### What this model does
Given a JSON report of clinical ML model performance metrics, the model:
1. Assigns a **Category** label (e.g. `Calibration Failure`, `Major Drift`, `Class Imbalance Problem`, `Healthy`)
2. Generates a concise **Explanation** with observations and recommendations
### Intended users
- ML engineers monitoring deployed clinical models
- Healthcare data science teams running periodic model audits
- Researchers studying automated model health assessment
### Out-of-scope use
- Not suitable for direct clinical decision-making or patient diagnosis
- Not a replacement for domain expert review of model performance
- Not designed for non-clinical ML tasks
- Should not be used on data types outside its training distribution (non-tabular metrics, images, etc.)
---
## How to Use
### Requirements
```bash
pip install transformers torch accelerate
```
### Basic inference
```python
import torch
from transformers import AutoTokenizer, AutoModelForCausalLM
model_id = "PhantomAjusshi/phi3-auditor-merged"
tokenizer = AutoTokenizer.from_pretrained(model_id, trust_remote_code=True)
model = AutoModelForCausalLM.from_pretrained(
model_id,
torch_dtype=torch.float16 if torch.cuda.is_available() else torch.float32,
device_map="auto",
trust_remote_code=True, # Required for custom Phi-3 modeling files
)
report = """{
"auc": 0.863,
"accuracy": 0.83,
"precision": 0.79,
"recall": 0.69,
"f1": 0.79,
"ece": 0.278,
"brier": 0.263,
"drift": 0.03,
"missing_rate": 0.003,
"label_shift": 0.06,
"pos_rate": 0.10,
"data_integrity_issues": 0
}"""
prompt = (
f"<|system|>\nYou are a clinical AI auditor model.\n"
f"<|user|>\nInstruction: Analyze the clinical model report and classify its health.\n\nReport:\n{report}\n"
f"<|assistant|>\n"
)
inputs = tokenizer(prompt, return_tensors="pt").to(model.device)
with torch.inference_mode():
outputs = model.generate(
**inputs,
max_new_tokens=400,
temperature=0.7,
top_p=0.9,
repetition_penalty=1.2,
do_sample=True,
)
response = tokenizer.decode(outputs[0], skip_special_tokens=True)
# Extract only the assistant's reply
reply = response.split("<|assistant|>")[-1].strip()
print(reply)
```
### Expected output format
```
Category: Calibration Failure
Explanation: High calibration error (ECE 0.278) despite reasonable discrimination (AUC 0.863).
The model's probability outputs are poorly aligned with actual outcomes. Recommend
recalibration using Platt scaling or isotonic regression, and threshold review.
```
### Input metrics reference
| Metric | Description |
|---|---|
| `auc` | Area Under the ROC Curve |
| `accuracy` | Overall classification accuracy |
| `precision` | Positive predictive value |
| `recall` | Sensitivity / true positive rate |
| `f1` | Harmonic mean of precision and recall |
| `ece` | Expected Calibration Error |
| `brier` | Brier score (probabilistic accuracy) |
| `drift` | Feature distribution drift score |
| `missing_rate` | Rate of missing input features |
| `label_shift` | Output label distribution shift |
| `pos_rate` | Positive prediction rate |
| `data_integrity_issues` | Count of detected data quality issues |
---
## Training Details
### Dataset
- **Name:** Custom synthetic clinical audit dataset (`audit_dataset_v2_5000.json`)
- **Size:** 5,000 labeled samples
- **Split:** 80% train (4,000) / 20% test (1,000)
- **Format:** JSONL — each record has `instruction`, `input` (metrics JSON), `output` (category + explanation)
- **Generation date:** November 17, 2025
Each sample pairs a set of synthetic model performance metrics with a human-written audit label and explanation covering categories such as:
- Healthy / Passing
- Calibration Failure
- Major Drift / Potential Drift
- Class Imbalance Problem
- Data Integrity Issue
- Needs Review / Critical Failure
### Training procedure
The base model was loaded in 8-bit using `BitsAndBytesConfig` and adapted with LoRA targeting the attention projection layers (`q_proj`, `k_proj`, `v_proj`, `o_proj`). After training, the LoRA adapter was merged into the base model weights using `peft.merge_and_unload()` and saved as full FP16 safetensors.
**Prompt format used during training:**
```
<|system|>
You are an AI auditor analyzing clinical model performance reports.
<|user|>
Instruction: Analyze the clinical model report and classify its health.
Report:
{ ...metrics JSON... }
<|assistant|>
Category: <label>
Explanation: <explanation>
```
### Hyperparameters
| Parameter | Value |
|---|---|
| Epochs | 3 |
| Batch size | 4 |
| Gradient accumulation steps | 4 |
| Effective batch size | 16 |
| Learning rate | 1e-4 |
| Warmup ratio | 0.1 |
| Max sequence length | 512 |
| Optimizer | AdamW (default) |
| Precision | FP16 (mixed) |
### Training loss
| Step | Epoch | Loss |
|---|---|---|
| 50 | 0.22 | 1.623 |
| 100 | 0.44 | 0.657 |
| 150 | 0.67 | 0.444 |
| 200 | 0.89 | 0.420 |
| 300 | 1.33 | 0.413 |
| 450 | 2.00 | 0.412 |
| 600 | 2.67 | 0.408 |
| 675 | 3.00 | ~0.410 |
Loss converged rapidly after the first 150 steps, stabilizing around 0.41 for the remainder of training.
---
## Evaluation
The model was evaluated on a held-out test set of 1,000 samples using weighted precision, recall, F1, and accuracy computed by extracting the `Category:` field from generated outputs and comparing to ground-truth labels.
> Formal evaluation metrics will be added here once a full benchmark run is completed.
---
## Limitations & Bias
- **Synthetic training data:** The model was trained entirely on synthetically generated audit reports. Real-world clinical model metrics may follow different distributions or contain edge cases not represented in training.
- **Label sensitivity:** The model may be sensitive to metric combinations near decision boundaries between categories.
- **No temporal reasoning:** The model does not reason about metric trends over time — each inference is based on a single snapshot of metrics.
- **English only:** All training data is in English.
- **Not a substitute for expert review:** Outputs should be treated as decision-support, not a final audit verdict.
---
## Repository & Related Work
- **Training code:** [Hospital-Audit-Trained-Model (GitHub)](https://github.com/PhantomAjusshi/Hospital-Audit-Trained-Model)
- **Web application:** [Hospital-Model-Audit-Website (GitHub)](https://github.com/PhantomAjusshi/Hospital-Model-Audit-Website) — a full-stack Next.js + FastAPI interface that uses this model via llama.cpp
---
## Citation
If you use this model in your work, please cite:
```bibtex
@misc{phi3-auditor-merged,
author = {PhantomAjusshi},
title = {phi3-auditor-merged: Phi-3-mini fine-tuned for clinical AI model auditing},
year = {2025},
publisher = {HuggingFace},
url = {https://huggingface.co/PhantomAjusshi/phi3-auditor-merged}
}
```
---
## License
This model is released under the **MIT License**.
The base model ([microsoft/Phi-3-mini-4k-instruct](https://huggingface.co/microsoft/Phi-3-mini-4k-instruct)) is subject to Microsoft's Phi-3 license. Please review it before use in commercial or production settings.

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{
"<|assistant|>": 32001,
"<|endoftext|>": 32000,
"<|end|>": 32007,
"<|placeholder1|>": 32002,
"<|placeholder2|>": 32003,
"<|placeholder3|>": 32004,
"<|placeholder4|>": 32005,
"<|placeholder5|>": 32008,
"<|placeholder6|>": 32009,
"<|system|>": 32006,
"<|user|>": 32010
}

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{% for message in messages %}{% if message['role'] == 'system' %}{{'<|system|>
' + message['content'] + '<|end|>
'}}{% elif message['role'] == 'user' %}{{'<|user|>
' + message['content'] + '<|end|>
'}}{% elif message['role'] == 'assistant' %}{{'<|assistant|>
' + message['content'] + '<|end|>
'}}{% endif %}{% endfor %}{% if add_generation_prompt %}{{ '<|assistant|>
' }}{% else %}{{ eos_token }}{% endif %}

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{
"architectures": [
"Phi3ForCausalLM"
],
"attention_bias": false,
"attention_dropout": 0.0,
"auto_map": {
"AutoConfig": "configuration_phi3.Phi3Config",
"AutoModelForCausalLM": "modeling_phi3.Phi3ForCausalLM"
},
"bos_token_id": 1,
"dtype": "float16",
"embd_pdrop": 0.0,
"eos_token_id": 32000,
"hidden_act": "silu",
"hidden_size": 3072,
"initializer_range": 0.02,
"intermediate_size": 8192,
"max_position_embeddings": 4096,
"model_type": "phi3",
"num_attention_heads": 32,
"num_hidden_layers": 32,
"num_key_value_heads": 32,
"original_max_position_embeddings": 4096,
"pad_token_id": 32000,
"partial_rotary_factor": 1.0,
"resid_pdrop": 0.0,
"rms_norm_eps": 1e-05,
"rope_scaling": null,
"rope_theta": 10000.0,
"sliding_window": 2047,
"tie_word_embeddings": false,
"transformers_version": "4.57.3",
"use_cache": true,
"vocab_size": 32064
}

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# coding=utf-8
# Copyright 2024 Microsoft and the HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Phi-3 model configuration"""
from transformers.configuration_utils import PretrainedConfig
from transformers.utils import logging
logger = logging.get_logger(__name__)
PHI3_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"microsoft/Phi-3-mini-4k-instruct": "https://huggingface.co/microsoft/Phi-3-mini-4k-instruct/resolve/main/config.json",
"microsoft/Phi-3-mini-128k-instruct": "https://huggingface.co/microsoft/Phi-3-mini-128k-instruct/resolve/main/config.json",
}
class Phi3Config(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`Phi3Model`]. It is used to instantiate a Phi-3
model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the
[microsoft/Phi-3-mini-4k-instruct](https://huggingface.co/microsoft/Phi-3-mini-4k-instruct).
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 32064):
Vocabulary size of the Phi-3 model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`Phi3Model`].
hidden_size (`int`, *optional*, defaults to 3072):
Dimension of the hidden representations.
intermediate_size (`int`, *optional*, defaults to 8192):
Dimension of the MLP representations.
num_hidden_layers (`int`, *optional*, defaults to 32):
Number of hidden layers in the Transformer decoder.
num_attention_heads (`int`, *optional*, defaults to 32):
Number of attention heads for each attention layer in the Transformer decoder.
num_key_value_heads (`int`, *optional*):
This is the number of key_value heads that should be used to implement Grouped Query Attention. If
`num_key_value_heads=num_attention_heads`, the model will use Multi Head Attention (MHA), if
`num_key_value_heads=1 the model will use Multi Query Attention (MQA) otherwise GQA is used. When
converting a multi-head checkpoint to a GQA checkpoint, each group key and value head should be constructed
by meanpooling all the original heads within that group. For more details checkout [this
paper](https://arxiv.org/pdf/2305.13245.pdf). If it is not specified, will default to
`num_attention_heads`.
resid_pdrop (`float`, *optional*, defaults to 0.0):
Dropout probability for mlp outputs.
embd_pdrop (`int`, *optional*, defaults to 0.0):
The dropout ratio for the embeddings.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio after computing the attention scores.
hidden_act (`str` or `function`, *optional*, defaults to `"silu"`):
The non-linear activation function (function or string) in the decoder.
max_position_embeddings (`int`, *optional*, defaults to 4096):
The maximum sequence length that this model might ever be used with.
original_max_position_embeddings (`int`, *optional*, defaults to 4096):
The maximum sequence length that this model was trained with. This is used to determine the size of the
original RoPE embeddings when using long scaling.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
rms_norm_eps (`float`, *optional*, defaults to 1e-05):
The epsilon value used for the RMSNorm.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models). Only
relevant if `config.is_decoder=True`. Whether to tie weight embeddings or not.
tie_word_embeddings (`bool`, *optional*, defaults to `False`):
Whether to tie weight embeddings
rope_theta (`float`, *optional*, defaults to 10000.0):
The base period of the RoPE embeddings.
rope_scaling (`dict`, *optional*):
The scaling strategy for the RoPE embeddings. If `None`, no scaling is applied. If a dictionary, it must
contain the following keys: `type`, `short_factor` and `long_factor`. The `type` must be `longrope` and
the `short_factor` and `long_factor` must be lists of numbers with the same length as the hidden size
divided by the number of attention heads divided by 2.
bos_token_id (`int`, *optional*, defaults to 1):
The id of the "beginning-of-sequence" token.
eos_token_id (`int`, *optional*, defaults to 32000):
The id of the "end-of-sequence" token.
pad_token_id (`int`, *optional*, defaults to 32000):
The id of the padding token.
sliding_window (`int`, *optional*):
Sliding window attention window size. If `None`, no sliding window is applied.
Example:
```python
>>> from transformers import Phi3Model, Phi3Config
>>> # Initializing a Phi-3 style configuration
>>> configuration = Phi3Config.from_pretrained("microsoft/Phi-3-mini-4k-instruct")
>>> # Initializing a model from the configuration
>>> model = Phi3Model(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "phi3"
keys_to_ignore_at_inference = ["past_key_values"]
def __init__(
self,
vocab_size=32064,
hidden_size=3072,
intermediate_size=8192,
num_hidden_layers=32,
num_attention_heads=32,
num_key_value_heads=None,
resid_pdrop=0.0,
embd_pdrop=0.0,
attention_dropout=0.0,
hidden_act="silu",
max_position_embeddings=4096,
original_max_position_embeddings=4096,
initializer_range=0.02,
rms_norm_eps=1e-5,
use_cache=True,
tie_word_embeddings=False,
rope_theta=10000.0,
rope_scaling=None,
bos_token_id=1,
eos_token_id=32000,
pad_token_id=32000,
sliding_window=None,
**kwargs,
):
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.intermediate_size = intermediate_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
if num_key_value_heads is None:
num_key_value_heads = num_attention_heads
self.num_key_value_heads = num_key_value_heads
self.resid_pdrop = resid_pdrop
self.embd_pdrop = embd_pdrop
self.attention_dropout = attention_dropout
self.hidden_act = hidden_act
self.max_position_embeddings = max_position_embeddings
self.original_max_position_embeddings = original_max_position_embeddings
self.initializer_range = initializer_range
self.rms_norm_eps = rms_norm_eps
self.use_cache = use_cache
self.rope_theta = rope_theta
self.rope_scaling = rope_scaling
self._rope_scaling_adjustment()
self._rope_scaling_validation()
self.sliding_window = sliding_window
super().__init__(
bos_token_id=bos_token_id,
eos_token_id=eos_token_id,
pad_token_id=pad_token_id,
tie_word_embeddings=tie_word_embeddings,
**kwargs,
)
def _rope_scaling_adjustment(self):
"""
Adjust the `type` of the `rope_scaling` configuration for backward compatibility.
"""
if self.rope_scaling is None:
return
rope_scaling_type = self.rope_scaling.get("type", None)
# For backward compatibility if previous version used "su" or "yarn"
if rope_scaling_type is not None and rope_scaling_type in ["su", "yarn"]:
self.rope_scaling["type"] = "longrope"
def _rope_scaling_validation(self):
"""
Validate the `rope_scaling` configuration.
"""
if self.rope_scaling is None:
return
if not isinstance(self.rope_scaling, dict) or len(self.rope_scaling) != 3:
raise ValueError(
"`rope_scaling` must be a dictionary with three fields, `type`, `short_factor` and `long_factor`, "
f"got {self.rope_scaling}"
)
rope_scaling_type = self.rope_scaling.get("type", None)
rope_scaling_short_factor = self.rope_scaling.get("short_factor", None)
rope_scaling_long_factor = self.rope_scaling.get("long_factor", None)
if rope_scaling_type is None or rope_scaling_type not in ["longrope"]:
raise ValueError(f"`rope_scaling`'s type field must be one of ['longrope'], got {rope_scaling_type}")
if not (
isinstance(rope_scaling_short_factor, list)
and all(isinstance(x, (int, float)) for x in rope_scaling_short_factor)
):
raise ValueError(
f"`rope_scaling`'s short_factor field must be a list of numbers, got {rope_scaling_short_factor}"
)
if not len(rope_scaling_short_factor) == self.hidden_size // self.num_attention_heads // 2:
raise ValueError(
f"`rope_scaling`'s short_factor field must have length {self.hidden_size // self.num_attention_heads // 2}, got {len(rope_scaling_short_factor)}"
)
if not (
isinstance(rope_scaling_long_factor, list)
and all(isinstance(x, (int, float)) for x in rope_scaling_long_factor)
):
raise ValueError(
f"`rope_scaling`'s long_factor field must be a list of numbers, got {rope_scaling_long_factor}"
)
if not len(rope_scaling_long_factor) == self.hidden_size // self.num_attention_heads // 2:
raise ValueError(
f"`rope_scaling`'s long_factor field must have length {self.hidden_size // self.num_attention_heads // 2}, got {len(rope_scaling_long_factor)}"
)

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{
"_from_model_config": true,
"bos_token_id": 1,
"eos_token_id": [
32000,
32001,
32007
],
"pad_token_id": 32000,
"transformers_version": "4.57.3"
}

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"metadata": {
"total_parameters": 3821079552,
"total_size": 7642159104
},
"weight_map": {
"lm_head.weight": "model-00002-of-00002.safetensors",
"model.embed_tokens.weight": "model-00001-of-00002.safetensors",
"model.layers.0.input_layernorm.weight": "model-00001-of-00002.safetensors",
"model.layers.0.mlp.down_proj.weight": "model-00001-of-00002.safetensors",
"model.layers.0.mlp.gate_up_proj.weight": "model-00001-of-00002.safetensors",
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