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Model: DUTIRbionlp/Taiyi-LLM
Source: Original Platform

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README.md

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+---
+tasks:
+- text-generation
+license: Apache License 2.0
+---
+
+#### Clone with HTTP
+```bash
+ git clone https://www.modelscope.cn/DUTIRbionlp/Taiyi-LLM.git
+```
+
+
+
+
+# 太一（Taiyi）：基于多任务指令微调的中英双语生物医学大模型
+
+[Github](https://github.com/DUTIR-BioNLP/Taiyi-LLM)  | [Demo](https://modelscope.cn/studios/DUTIRbionlp/Taiyi-demo) | [Paper](https://academic.oup.com/jamia/article/31/9/1865/7616487?utm_source=authortollfreelink&utm_campaign=jamia&utm_medium=email&guestAccessKey=4c56c223-a555-4949-bef7-16e77f8baa10)
+  
+
+
+
+#**项目背景**
+
+随着深度学习技术的迅速发展，类ChatGPT这样的大语言模型在自然语言处理领域已经取得了显著的进展。面向生物医学领域，大语言模型有助于医生与患者之间的沟通，提供有用的医学信息，并在辅助诊疗、生物医学知识发现、药物研发、个性化医疗方案等方面具有巨大潜力。然而，在人工智能社区中，已有的开源生物医学大模型相对较少，且大多主要专注于单语（中文或英语）的医疗问答对话。因此，本项目开展了面向生物医学领域大模型的研究，并发布初版中英双语生物医学大模型——太一（Taiyi），旨在探索大模型在生物医学领域中双语自然语言处理多任务的能力。
+
+
+**项目特色**
+
+- **丰富的生物医学训练资源**：面向生物医学领域，本项目收集整理了丰富的中英双语生物医学自然语言处理（BioNLP）训练语料，总共包含38个中文数据集，覆盖10种BioNLP中文任务；102个英文数据集，覆盖12种BioNLP英文任务。本项目根据任务类型，设计制定任务数据统一格式，对数据集进行了统一格式转换。
+- **出色的中英双语BioNLP多任务能力**：通过丰富的中英双语任务指令数据（超过100W条样本）进行大模型指令微调，使模型具备了出色的中英双语生物医学智能问答、医患对话、报告生成、信息抽取、机器翻译、标题生成、文本分类等多种BioNLP能力。
+- **优秀的泛化能力**：除了生物医学领域，模型仍具备通用领域对话能力，并通过设计指令模板多样性，使模型具备了较优秀的指令理解能力，在同类任务的不同场景下具有较好的泛化能力，并激发了模型一定的零样本学习能力。
+
+为了促进生物医学领域NLP发展，本项目开源了中英双语BioNLP数据集整理信息、“太一”大模型权重、模型推理使用脚本。
+
+
+
+
+## 基座介绍
+
+当前版本的太一是基于[Qwen-7B-base](https://huggingface.co/Qwen/Qwen-7B)通过指令微调得到。通义千问-7B（Qwen-7B）是阿里云研发的通义千问大模型系列的70亿参数规模的模型，在超过2万亿tokens数据进行预训练，包含高质量中、英、多语言、代码、数学等数据，涵盖通用及专业领域的训练语料。
+
+
+
+
+## 模型推理
+
+本项目将多轮对话拼接成如下格式，然后进行tokenize。其中eod为qwen tokenizer中的特殊字符<|endoftext|>
+
+```
+<eod>input1<eod>answer1<eod>input2<eod>answer2<eod>.....
+```
+可使用如下代码完成使用我们的模型完成推理。
+```python
+
+from modelscope import AutoModelForCausalLM, AutoTokenizer
+import torch
+
+model_name = "DUTIRbionlp/Taiyi-LLM"
+
+device = 'cuda:0'
+
+model = AutoModelForCausalLM.from_pretrained(
+    model_name,
+    low_cpu_mem_usage=True,
+    torch_dtype=torch.float16,
+    trust_remote_code=True,
+    device_map = device
+)
+
+model.eval()
+tokenizer = AutoTokenizer.from_pretrained(
+    model_name,
+    trust_remote_code=True
+)
+
+import logging
+logging.disable(logging.WARNING)
+tokenizer.pad_token_id = tokenizer.eod_id
+tokenizer.bos_token_id = tokenizer.eod_id
+tokenizer.eos_token_id = tokenizer.eod_id
+history_token_ids = torch.tensor([[]], dtype=torch.long)
+max_new_tokens = 500
+top_p = 0.9
+temperature = 0.3
+repetition_penalty = 1.0
+
+# 开始对话
+history_max_len = 1000 
+utterance_id = 0
+history_token_ids = None
+
+user_input = "你好，请问你是谁？"
+
+input_ids = tokenizer(user_input, return_tensors="pt", add_special_tokens=False).input_ids
+bos_token_id = torch.tensor([[tokenizer.bos_token_id]], dtype=torch.long)
+eos_token_id = torch.tensor([[tokenizer.eos_token_id]], dtype=torch.long)
+user_input_ids = torch.concat([bos_token_id,input_ids, eos_token_id], dim=1)
+
+model_input_ids = user_input_ids.to(device)
+with torch.no_grad():
+    outputs = model.generate(
+        input_ids=model_input_ids, max_new_tokens=max_new_tokens, do_sample=True, top_p=top_p,
+        temperature=temperature, repetition_penalty=repetition_penalty, eos_token_id=tokenizer.eos_token_id
+    )
+
+response = tokenizer.batch_decode(outputs)
+print(response[0])
+#<|endoftext|>你好，请问你是谁？<|endoftext|>您好，我是医疗语言大模型Taiyi。<|endoftext|>
+```
+
+本项目提供两个用于对话的测试代码。可使用```dialogue_one_trun.py```中的程序进行单轮问答对话测试，或者使用```dialogue_multi_trun.py```中的示例代码进行多轮对话问答测试。
+
+注：为了保证推理速度，建议使用4090显卡。
+
+## 引用
+如果你使用到了本项目的仓库，请引用下面论文。
+```
+@article{Taiyi,
+  title="{Taiyi: A Bilingual Fine-Tuned Large Language Model for Diverse Biomedical Tasks}",
+  author={Ling Luo, Jinzhong Ning, Yingwen Zhao, Zhijun Wang, Zeyuan Ding, Peng Chen, Weiru Fu, Qinyu Han, Guangtao Xu, Yunzhi Qiu, Dinghao Pan, Jiru Li, Hao Li, Wenduo Feng, Senbo Tu, Yuqi Liu, Zhihao Yang, Jian Wang, Yuanyuan Sun, Hongfei Lin},
+  journal={arXiv preprint arXiv:2311.11608},
+  year={2023},
+}
+```

config.json

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+{
+  "_name_or_path": "/home/Users/guoj/BIO_LLM/New_qwen/Qwen/Qwen-7B",
+  "architectures": [
+    "QWenLMHeadModel"
+  ],
+  "attn_dropout_prob": 0.0,
+  "auto_map": {
+    "AutoConfig": "configuration_qwen.QWenConfig",
+    "AutoModelForCausalLM": "modeling_qwen.QWenLMHeadModel"
+  },
+  "bf16": true,
+  "emb_dropout_prob": 0.0,
+  "fp16": false,
+  "fp32": false,
+  "hidden_size": 4096,
+  "initializer_range": 0.02,
+  "intermediate_size": 22016,
+  "kv_channels": 128,
+  "layer_norm_epsilon": 1e-06,
+  "max_position_embeddings": 8192,
+  "model_type": "qwen",
+  "no_bias": true,
+  "num_attention_heads": 32,
+  "num_hidden_layers": 32,
+  "onnx_safe": null,
+  "rotary_emb_base": 10000,
+  "rotary_pct": 1.0,
+  "scale_attn_weights": true,
+  "seq_length": 2048,
+  "tie_word_embeddings": false,
+  "tokenizer_type": "QWenTokenizer",
+  "torch_dtype": "bfloat16",
+  "transformers_version": "4.31.0",
+  "use_cache": true,
+  "use_dynamic_ntk": true,
+  "use_flash_attn": true,
+  "use_logn_attn": true,
+  "vocab_size": 151936
+}

configuration.json

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+{"framework":"Pytorch","task":"text-generation"}

configuration_qwen.py

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+# Copyright (c) Alibaba Cloud.
+#
+# This source code is licensed under the license found in the
+# LICENSE file in the root directory of this source tree.
+
+from transformers import PretrainedConfig
+
+
+class QWenConfig(PretrainedConfig):
+    model_type = "qwen"
+    keys_to_ignore_at_inference = ["past_key_values"]
+
+    def __init__(
+        self,
+        vocab_size=151936,
+        hidden_size=4096,
+        num_hidden_layers=32,
+        num_attention_heads=32,
+        emb_dropout_prob=0.0,
+        attn_dropout_prob=0.0,
+        layer_norm_epsilon=1e-6,
+        initializer_range=0.02,
+        max_position_embeddings=8192,
+        scale_attn_weights=True,
+        use_cache=True,
+        bf16=False,
+        fp16=False,
+        fp32=False,
+        kv_channels=128,
+        rotary_pct=1.0,
+        rotary_emb_base=10000,
+        use_dynamic_ntk=True,
+        use_logn_attn=True,
+        use_flash_attn="auto",
+        intermediate_size=22016,
+        no_bias=True,
+        tie_word_embeddings=False,
+        **kwargs,
+    ):
+        self.vocab_size = vocab_size
+        self.hidden_size = hidden_size
+        self.intermediate_size = intermediate_size
+        self.num_hidden_layers = num_hidden_layers
+        self.num_attention_heads = num_attention_heads
+        self.emb_dropout_prob = emb_dropout_prob
+        self.attn_dropout_prob = attn_dropout_prob
+        self.layer_norm_epsilon = layer_norm_epsilon
+        self.initializer_range = initializer_range
+        self.scale_attn_weights = scale_attn_weights
+        self.use_cache = use_cache
+        self.max_position_embeddings = max_position_embeddings
+        self.bf16 = bf16
+        self.fp16 = fp16
+        self.fp32 = fp32
+        self.kv_channels = kv_channels
+        self.rotary_pct = rotary_pct
+        self.rotary_emb_base = rotary_emb_base
+        self.use_dynamic_ntk = use_dynamic_ntk
+        self.use_logn_attn = use_logn_attn
+        self.use_flash_attn = use_flash_attn
+        self.no_bias = no_bias
+        super().__init__(
+            tie_word_embeddings=tie_word_embeddings,
+            **kwargs
+        )

generation_config.json

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+{
+  "_from_model_config": true,
+  "transformers_version": "4.31.0"
+}

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qwen_generation_utils.py

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+# Copyright (c) Alibaba Cloud.
+#
+# This source code is licensed under the license found in the
+# LICENSE file in the root directory of this source tree.
+
+"""Generation support."""
+
+from typing import Tuple, List, Union, Iterable
+
+import numpy as np
+import torch
+import torch.nn.functional as F
+from transformers import PreTrainedTokenizer
+from transformers import logging
+from transformers.generation import LogitsProcessor
+
+logger = logging.get_logger(__name__)
+
+# Types.
+HistoryType = List[Tuple[str, str]]
+TokensType = List[int]
+BatchTokensType = List[List[int]]
+
+
+def pad_batch(batch: BatchTokensType, pad_id: int, seq_length: int) -> BatchTokensType:
+    for tokens in batch:
+        context_length = len(tokens)
+        if context_length < seq_length:
+            tokens.extend([pad_id] * (seq_length - context_length))
+    return batch
+
+
+def get_ltor_masks_and_position_ids(
+    data,
+    eod_token,
+    reset_position_ids,
+    reset_attention_mask,
+    eod_mask_loss,
+):
+    """Build masks and position id for left to right model."""
+
+    # Extract batch size and sequence length.
+    micro_batch_size, seq_length = data.size()
+
+    # Attention mask (lower triangular).
+    if reset_attention_mask:
+        att_mask_batch = micro_batch_size
+    else:
+        att_mask_batch = 1
+    attention_mask = torch.tril(
+        torch.ones((att_mask_batch, seq_length, seq_length), device=data.device)
+    ).view(att_mask_batch, 1, seq_length, seq_length)
+
+    # Loss mask.
+    loss_mask = torch.ones(data.size(), dtype=torch.float, device=data.device)
+    if eod_mask_loss:
+        loss_mask[data == eod_token] = 0.0
+
+    # Position ids.
+    position_ids = torch.arange(seq_length, dtype=torch.long, device=data.device)
+    position_ids = position_ids.unsqueeze(0).expand_as(data)
+    # We need to clone as the ids will be modifed based on batch index.
+    if reset_position_ids:
+        position_ids = position_ids.clone()
+
+    if reset_position_ids or reset_attention_mask:
+        # Loop through the batches:
+        for b in range(micro_batch_size):
+
+            # Find indecies where EOD token is.
+            eod_index = position_ids[b, data[b] == eod_token]
+            # Detach indecies from positions if going to modify positions.
+            if reset_position_ids:
+                eod_index = eod_index.clone()
+
+            # Loop through EOD indecies:
+            prev_index = 0
+            for j in range(eod_index.size()[0]):
+                i = eod_index[j]
+                # Mask attention loss.
+                if reset_attention_mask:
+                    attention_mask[b, 0, (i + 1) :, : (i + 1)] = 0
+                # Reset positions.
+                if reset_position_ids:
+                    position_ids[b, (i + 1) :] -= i + 1 - prev_index
+                    prev_index = i + 1
+
+    # Convert attention mask to binary:
+    attention_mask = attention_mask < 0.5
+
+    return attention_mask, loss_mask, position_ids
+
+
+def get_batch(context_tokens: torch.LongTensor, eod_id: int):
+    """Generate batch from context tokens."""
+    # Move to GPU.
+    tokens = context_tokens.contiguous().to(context_tokens.device)
+    # Get the attention mask and postition ids.
+    attention_mask, _, position_ids = get_ltor_masks_and_position_ids(
+        tokens,
+        eod_id,
+        reset_position_ids=False,
+        reset_attention_mask=False,
+        eod_mask_loss=False,
+    )
+    return tokens, attention_mask, position_ids
+
+
+def get_stop_words_ids(chat_format, tokenizer):
+    if chat_format == "raw":
+        stop_words_ids = [tokenizer.encode("Human:"), [tokenizer.eod_id]]
+    elif chat_format == "chatml":
+        stop_words_ids = [[tokenizer.im_end_id], [tokenizer.im_start_id]]
+    else:
+        raise NotImplementedError(f"Unknown chat format {chat_format!r}")
+    return stop_words_ids
+
+
+def make_context(
+    tokenizer: PreTrainedTokenizer,
+    query: str,
+    history: List[Tuple[str, str]] = None,
+    system: str = "",
+    max_window_size: int = 6144,
+    chat_format: str = "chatml",
+):
+    if history is None:
+        history = []
+
+    if chat_format == "chatml":
+        im_start, im_end = "<|im_start|>", "<|im_end|>"
+        im_start_tokens = [tokenizer.im_start_id]
+        im_end_tokens = [tokenizer.im_end_id]
+        nl_tokens = tokenizer.encode("\n")
+
+        def _tokenize_str(role, content):
+            return f"{role}\n{content}", tokenizer.encode(
+                role, allowed_special=set()
+            ) + nl_tokens + tokenizer.encode(content, allowed_special=set())
+
+        system_text, system_tokens_part = _tokenize_str("system", system)
+        system_tokens = im_start_tokens + system_tokens_part + im_end_tokens
+
+        raw_text = ""
+        context_tokens = []
+
+        for turn_query, turn_response in reversed(history):
+            query_text, query_tokens_part = _tokenize_str("user", turn_query)
+            query_tokens = im_start_tokens + query_tokens_part + im_end_tokens
+            response_text, response_tokens_part = _tokenize_str(
+                "assistant", turn_response
+            )
+            response_tokens = im_start_tokens + response_tokens_part + im_end_tokens
+
+            next_context_tokens = nl_tokens + query_tokens + nl_tokens + response_tokens
+            prev_chat = (
+                f"\n{im_start}{query_text}{im_end}\n{im_start}{response_text}{im_end}"
+            )
+
+            current_context_size = (
+                len(system_tokens) + len(next_context_tokens) + len(context_tokens)
+            )
+            if current_context_size < max_window_size:
+                context_tokens = next_context_tokens + context_tokens
+                raw_text = prev_chat + raw_text
+            else:
+                break
+
+        context_tokens = system_tokens + context_tokens
+        raw_text = f"{im_start}{system_text}{im_end}" + raw_text
+        context_tokens += (
+            nl_tokens
+            + im_start_tokens
+            + _tokenize_str("user", query)[1]
+            + im_end_tokens
+            + nl_tokens
+            + im_start_tokens
+            + tokenizer.encode("assistant")
+            + nl_tokens
+        )
+        raw_text += f"\n{im_start}user\n{query}{im_end}\n{im_start}assistant\n"
+
+    elif chat_format == "raw":
+        raw_text = query
+        context_tokens = tokenizer.encode(raw_text)
+    else:
+        raise NotImplementedError(f"Unknown chat format {chat_format!r}")
+
+    return raw_text, context_tokens
+
+
+def _decode_default(
+    tokens: List[int],
+    *,
+    stop_words: List[str],
+    eod_words: List[str],
+    tokenizer: PreTrainedTokenizer,
+    raw_text_len: int,
+    verbose: bool = False,
+    return_end_reason: bool = False,
+    errors: str='replace',
+):
+    trim_decode_tokens = tokenizer.decode(tokens, errors=errors)[raw_text_len:]
+    if verbose:
+        print("\nRaw Generate: ", trim_decode_tokens)
+
+    end_reason = f"Gen length {len(tokens)}"
+    for stop_word in stop_words:
+        trim_decode_tokens = trim_decode_tokens.replace(stop_word, "").strip()
+    for eod_word in eod_words:
+        if eod_word in trim_decode_tokens:
+            end_reason = f"Gen {eod_word!r}"
+        trim_decode_tokens = trim_decode_tokens.split(eod_word)[0]
+    trim_decode_tokens = trim_decode_tokens.strip()
+    if verbose:
+        print("\nEnd Reason:", end_reason)
+        print("\nGenerate: ", trim_decode_tokens)
+
+    if return_end_reason:
+        return trim_decode_tokens, end_reason
+    else:
+        return trim_decode_tokens
+
+
+def _decode_chatml(
+    tokens: List[int],
+    *,
+    stop_words: List[str],
+    eod_token_ids: List[int],
+    tokenizer: PreTrainedTokenizer,
+    raw_text_len: int,
+    context_length: int,
+    verbose: bool = False,
+    return_end_reason: bool = False,
+    errors: str='replace'
+):
+    end_reason = f"Gen length {len(tokens)}"
+    eod_token_idx = context_length
+    for eod_token_idx in range(context_length, len(tokens)):
+        if tokens[eod_token_idx] in eod_token_ids:
+            end_reason = f"Gen {tokenizer.decode([tokens[eod_token_idx]])!r}"
+            break
+
+    trim_decode_tokens = tokenizer.decode(tokens[:eod_token_idx], errors=errors)[raw_text_len:]
+    if verbose:
+        print("\nRaw Generate w/o EOD:", tokenizer.decode(tokens, errors=errors)[raw_text_len:])
+        print("\nRaw Generate:", trim_decode_tokens)
+        print("\nEnd Reason:", end_reason)
+    for stop_word in stop_words:
+        trim_decode_tokens = trim_decode_tokens.replace(stop_word, "").strip()
+    trim_decode_tokens = trim_decode_tokens.strip()
+    if verbose:
+        print("\nGenerate:", trim_decode_tokens)
+
+    if return_end_reason:
+        return trim_decode_tokens, end_reason
+    else:
+        return trim_decode_tokens
+
+
+def decode_tokens(
+    tokens: Union[torch.LongTensor, TokensType],
+    tokenizer: PreTrainedTokenizer,
+    raw_text_len: int,
+    context_length: int,
+    chat_format: str,
+    verbose: bool = False,
+    return_end_reason: bool = False,
+    errors: str="replace",
+) -> str:
+    if torch.is_tensor(tokens):
+        tokens = tokens.cpu().numpy().tolist()
+
+    if chat_format == "chatml":
+        return _decode_chatml(
+            tokens,
+            stop_words=[],
+            eod_token_ids=[tokenizer.im_start_id, tokenizer.im_end_id],
+            tokenizer=tokenizer,
+            raw_text_len=raw_text_len,
+            context_length=context_length,
+            verbose=verbose,
+            return_end_reason=return_end_reason,
+            errors=errors,
+        )
+    elif chat_format == "raw":
+        return _decode_default(
+            tokens,
+            stop_words=["<|endoftext|>"],
+            eod_words=["<|endoftext|>"],
+            tokenizer=tokenizer,
+            raw_text_len=raw_text_len,
+            verbose=verbose,
+            return_end_reason=return_end_reason,
+            errors=errors,
+        )
+    else:
+        raise NotImplementedError(f"Unknown chat format {chat_format!r}")
+
+
+class StopWordsLogitsProcessor(LogitsProcessor):
+    """
+    :class:`transformers.LogitsProcessor` that enforces that when specified sequences appear, stop geration.
+
+    Args:
+        stop_words_ids (:obj:`List[List[int]]`):
+            List of list of token ids of stop ids. In order to get the tokens of the words
+            that should not appear in the generated text, use :obj:`tokenizer(bad_word,
+            add_prefix_space=True).input_ids`.
+        eos_token_id (:obj:`int`):
+            The id of the `end-of-sequence` token.
+    """
+
+    def __init__(self, stop_words_ids: Iterable[Iterable[int]], eos_token_id: int):
+
+        if not isinstance(stop_words_ids, List) or len(stop_words_ids) == 0:
+            raise ValueError(
+                f"`stop_words_ids` has to be a non-emtpy list, but is {stop_words_ids}."
+            )
+        if any(not isinstance(bad_word_ids, list) for bad_word_ids in stop_words_ids):
+            raise ValueError(
+                f"`stop_words_ids` has to be a list of lists, but is {stop_words_ids}."
+            )
+        if any(
+            any(
+                (not isinstance(token_id, (int, np.integer)) or token_id < 0)
+                for token_id in stop_word_ids
+            )
+            for stop_word_ids in stop_words_ids
+        ):
+            raise ValueError(
+                f"Each list in `stop_words_ids` has to be a list of positive integers, but is {stop_words_ids}."
+            )
+
+        self.stop_words_ids = list(
+            filter(
+                lambda bad_token_seq: bad_token_seq != [eos_token_id], stop_words_ids
+            )
+        )
+        self.eos_token_id = eos_token_id
+        for stop_token_seq in self.stop_words_ids:
+            assert (
+                len(stop_token_seq) > 0
+            ), "Stop words token sequences {} cannot have an empty list".format(
+                stop_words_ids
+            )
+
+    def __call__(
+        self, input_ids: torch.LongTensor, scores: torch.FloatTensor
+    ) -> torch.FloatTensor:
+        stopped_samples = self._calc_stopped_samples(input_ids)
+        for i, should_stop in enumerate(stopped_samples):
+            if should_stop:
+                scores[i, self.eos_token_id] = float(2**15)
+        return scores
+
+    def _tokens_match(self, prev_tokens: torch.LongTensor, tokens: List[int]) -> bool:
+        if len(tokens) == 0:
+            # if bad word tokens is just one token always ban it
+            return True
+        elif len(tokens) > len(prev_tokens):
+            # if bad word tokens are longer then prev input_ids they can't be equal
+            return False
+        elif prev_tokens[-len(tokens) :].tolist() == tokens:
+            # if tokens match
+            return True
+        else:
+            return False
+
+    def _calc_stopped_samples(self, prev_input_ids: Iterable[int]) -> Iterable[int]:
+        stopped_samples = []
+        for prev_input_ids_slice in prev_input_ids:
+            match = False
+            for stop_token_seq in self.stop_words_ids:
+                if self._tokens_match(prev_input_ids_slice, stop_token_seq):
+                    # if tokens do not match continue
+                    match = True
+                    break
+            stopped_samples.append(match)
+
+        return stopped_samples
+
+
+def top_k_logits(logits, top_k=0, top_p=0.0, filter_value=-float("Inf")):
+    """This function has been mostly taken from huggingface conversational
+    ai code at
+        https://medium.com/huggingface/how-to-build-a-state-of-the-art-
+             conversational-ai-with-transfer-learning-2d818ac26313"""
+
+    if top_k > 0:
+        # Remove all tokens with a probability less than the
+        # last token of the top-k
+        indices_to_remove = logits < torch.topk(logits, top_k)[0][..., -1, None]
+        logits[indices_to_remove] = filter_value
+
+    if top_p > 0.0:
+        # Cconvert to 1D
+        sorted_logits, sorted_indices = torch.sort(logits, descending=True, dim=-1)
+        cumulative_probs = torch.cumsum(F.softmax(sorted_logits, dim=-1), dim=-1)
+
+        # Remove tokens with cumulative probability above the threshold
+        sorted_indices_to_remove = cumulative_probs > top_p
+        # Shift the indices to the right to keep also the first token
+        # above the threshold
+        sorted_indices_to_remove[..., 1:] = sorted_indices_to_remove[..., :-1].clone()
+        sorted_indices_to_remove[..., 0] = 0
+        for i in range(sorted_indices.size(0)):
+            indices_to_remove = sorted_indices[i][sorted_indices_to_remove[i]]
+            logits[i][indices_to_remove] = filter_value
+
+    return logits
+
+
+def switch(val1, val2, boolean):
+    boolean = boolean.type_as(val1)
+    return (1 - boolean) * val1 + boolean * val2

special_tokens_map.json

@@ -0,0 +1 @@
+{}

tokenization_qwen.py

@@ -0,0 +1,228 @@
+# Copyright (c) Alibaba Cloud.
+#
+# This source code is licensed under the license found in the
+# LICENSE file in the root directory of this source tree.
+
+"""Tokenization classes for QWen."""
+
+import base64
+import logging
+import os
+import unicodedata
+from typing import Collection, Dict, List, Set, Tuple, Union
+
+import tiktoken
+from transformers import PreTrainedTokenizer, AddedToken
+
+logger = logging.getLogger(__name__)
+
+
+VOCAB_FILES_NAMES = {"vocab_file": "qwen.tiktoken"}
+
+PAT_STR = r"""(?i:'s|'t|'re|'ve|'m|'ll|'d)|[^\r\n\p{L}\p{N}]?\p{L}+|\p{N}| ?[^\s\p{L}\p{N}]+[\r\n]*|\s*[\r\n]+|\s+(?!\S)|\s+"""
+ENDOFTEXT = "<|endoftext|>"
+IMSTART = "<|im_start|>"
+IMEND = "<|im_end|>"
+# as the default behavior is changed to allow special tokens in
+# regular texts, the surface forms of special tokens need to be
+# as different as possible to minimize the impact
+EXTRAS = tuple((f"<|extra_{i}|>" for i in range(205)))
+SPECIAL_TOKENS = (
+    ENDOFTEXT,
+    IMSTART,
+    IMEND,
+) + EXTRAS
+
+
+def _load_tiktoken_bpe(tiktoken_bpe_file: str) -> Dict[bytes, int]:
+    with open(tiktoken_bpe_file, "rb") as f:
+        contents = f.read()
+    return {
+        base64.b64decode(token): int(rank)
+        for token, rank in (line.split() for line in contents.splitlines() if line)
+    }
+
+class QWenTokenizer(PreTrainedTokenizer):
+    """QWen tokenizer."""
+
+    vocab_files_names = VOCAB_FILES_NAMES
+
+    def __init__(
+        self,
+        vocab_file,
+        errors="replace",
+        **kwargs,
+    ):
+        super().__init__(**kwargs)
+
+        self.errors = errors  # how to handle errors in decoding
+
+        self.mergeable_ranks = _load_tiktoken_bpe(vocab_file)  # type: dict[bytes, int]
+        self.special_tokens = {
+            token: index
+            for index, token in enumerate(
+                SPECIAL_TOKENS, start=len(self.mergeable_ranks)
+            )
+        }
+
+        enc = tiktoken.Encoding(
+            "Qwen",
+            pat_str=PAT_STR,
+            mergeable_ranks=self.mergeable_ranks,
+            special_tokens=self.special_tokens,
+        )
+        assert (
+            len(self.mergeable_ranks) + len(self.special_tokens) == enc.n_vocab
+        ), f"{len(self.mergeable_ranks) + len(self.special_tokens)} != {enc.n_vocab} in encoding"
+
+        self.decoder = {
+            v: k for k, v in self.mergeable_ranks.items()
+        }  # type: dict[int, bytes|str]
+        self.decoder.update({v: k for k, v in self.special_tokens.items()})
+
+        self.tokenizer = enc  # type: tiktoken.Encoding
+
+        self.eod_id = self.tokenizer.eot_token
+        self.im_start_id = self.special_tokens[IMSTART]
+        self.im_end_id = self.special_tokens[IMEND]
+
+    def __len__(self) -> int:
+        return self.tokenizer.n_vocab
+
+    def get_vocab(self) -> Dict[bytes, int]:
+        return self.mergeable_ranks
+
+    def convert_tokens_to_ids(
+        self, tokens: Union[bytes, str, List[Union[bytes, str]]]
+    ) -> List[int]:
+        ids = []
+        if isinstance(tokens, (str, bytes)):
+            if tokens in self.special_tokens:
+                return self.special_tokens[tokens]
+            else:
+                return self.mergeable_ranks.get(tokens)
+        for token in tokens:
+            if token in self.special_tokens:
+                ids.append(self.special_tokens[token])
+            else:
+                ids.append(self.mergeable_ranks.get(token))
+        return ids
+
+    def _add_tokens(self, new_tokens: Union[List[str], List[AddedToken]], special_tokens: bool = False) -> int:
+        if not special_tokens and new_tokens:
+            raise ValueError('Adding regular tokens is not supported')
+        for token in new_tokens:
+            surface_form = token.content if isinstance(token, AddedToken) else token
+            if surface_form not in SPECIAL_TOKENS:
+                raise ValueError('Adding unknown special tokens is not supported')
+        return 0
+
+    def save_vocabulary(self, save_directory: str, **kwargs) -> Tuple[str]:
+        """
+        Save only the vocabulary of the tokenizer (vocabulary).
+
+        Returns:
+            `Tuple(str)`: Paths to the files saved.
+        """
+        file_path = os.path.join(save_directory, "qwen.tiktoken")
+        with open(file_path, "w", encoding="utf8") as w:
+            for k, v in self.mergeable_ranks.items():
+                line = base64.b64encode(k).decode("utf8") + " " + str(v) + "\n"
+                w.write(line)
+        return (file_path,)
+
+    def tokenize(
+        self,
+        text: str,
+        allowed_special: Union[Set, str] = "all",
+        disallowed_special: Union[Collection, str] = (),
+        **kwargs,
+    ) -> List[Union[bytes, str]]:
+        """
+        Converts a string in a sequence of tokens.
+
+        Args:
+            text (`str`):
+                The sequence to be encoded.
+            allowed_special (`Literal["all"]` or `set`):
+                The surface forms of the tokens to be encoded as special tokens in regular texts.
+                Default to "all".
+            disallowed_special (`Literal["all"]` or `Collection`):
+                The surface forms of the tokens that should not be in regular texts and trigger errors.
+                Default to an empty tuple.
+
+            kwargs (additional keyword arguments, *optional*):
+                Will be passed to the underlying model specific encode method.
+
+        Returns:
+            `List[bytes|str]`: The list of tokens.
+        """
+        tokens = []
+        text = unicodedata.normalize("NFC", text)
+
+        # this implementation takes a detour: text -> token id -> token surface forms
+        for t in self.tokenizer.encode(
+            text, allowed_special=allowed_special, disallowed_special=disallowed_special
+        ):
+            tokens.append(self.decoder[t])
+        return tokens
+
+    def convert_tokens_to_string(self, tokens: List[Union[bytes, str]]) -> str:
+        """
+        Converts a sequence of tokens in a single string.
+        """
+        text = ""
+        temp = b""
+        for t in tokens:
+            if isinstance(t, str):
+                if temp:
+                    text += temp.decode("utf-8", errors=self.errors)
+                    temp = b""
+                text += t
+            elif isinstance(t, bytes):
+                temp += t
+            else:
+                raise TypeError("token should only be of type types or str")
+        if temp:
+            text += temp.decode("utf-8", errors=self.errors)
+        return text
+
+    @property
+    def vocab_size(self):
+        return self.tokenizer.n_vocab
+
+    def _convert_id_to_token(self, index: int) -> Union[bytes, str]:
+        """Converts an id to a token, special tokens included"""
+        if index in self.decoder:
+            return self.decoder[index]
+        raise ValueError("unknown ids")
+
+    def _convert_token_to_id(self, token: Union[bytes, str]) -> int:
+        """Converts a token to an id using the vocab, special tokens included"""
+        if token in self.special_tokens:
+            return self.special_tokens[token]
+        if token in self.mergeable_ranks:
+            return self.mergeable_ranks[token]
+        raise ValueError("unknown token")
+
+    def _tokenize(self, text: str, **kwargs):
+        """
+        Converts a string in a sequence of tokens (string), using the tokenizer. Split in words for word-based
+        vocabulary or sub-words for sub-word-based vocabularies (BPE/SentencePieces/WordPieces).
+
+        Do NOT take care of added tokens.
+        """
+        raise NotImplementedError
+
+    def _decode(
+        self,
+        token_ids: Union[int, List[int]],
+        skip_special_tokens: bool = False,
+        errors: str = None,
+        **kwargs,
+    ) -> str:
+        if isinstance(token_ids, int):
+            token_ids = [token_ids]
+        if skip_special_tokens:
+            token_ids = [i for i in token_ids if i < self.eod_id]
+        return self.tokenizer.decode(token_ids, errors=errors or self.errors)

tokenizer_config.json

@@ -0,0 +1,11 @@
+{
+  "auto_map": {
+    "AutoTokenizer": [
+      "tokenization_qwen.QWenTokenizer",
+      null
+    ]
+  },
+  "clean_up_tokenization_spaces": true,
+  "model_max_length": 8192,
+  "tokenizer_class": "QWenTokenizer"
+}