初始化项目，由ModelHub XC社区提供模型
Model: BGI-HangzhouAI/Genos-m Source: Original Platform
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ModelHub XC
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README.md
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README.md
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---
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license: apache-2.0
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language:
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- dna
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tags:
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- biology
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- genomics
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- microbe
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- dna-language-model
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- mixture-of-experts
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- metagenomics
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library_name: transformers
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---
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# Genos-m
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Genos-m is a foundation model for human-associated microbial genomes. It is trained to model microbial DNA sequences at single-nucleotide resolution and supports ultra-long genomic contexts up to one million tokens.
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For instructions, details, benchmarks, and examples, please refer to Genos-m GitHub and paper.
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## Model Specification
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| Specification | Genos-m-4.7B |
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| --- | --- |
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| Total parameters | 4.7B |
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| Activated parameters | 0.33B |
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| Architecture type | MoE |
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| Number of experts | 32 |
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| Selected experts per token | 2 |
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| Number of layers | 12 |
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| Attention hidden size | 1024 |
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| Number of attention heads | 16 |
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| Query groups | 8 |
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| MoE hidden size per expert | 4096 |
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| Vocabulary size | 128 padded |
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| Context length | up to 1M |
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| Training objective | next-token prediction |
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## Training Data
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Genos-m was pretrained on curated microbial genome resources, including GTDB R220 representative prokaryotic genomes, public human-associated microbial genomes, in-house high-quality human gut MAGs, and UHGV human gut phage genomes. The final pre-training corpus contains approximately 1.2T tokens and covers 186 phyla, 3,448 families, and 69,056 species. Within this corpus, the retained human-associated prokaryotic subset covers 45 phyla, 585 families, and 12,273 species across major human microbial habitats, including the gut, oral cavity, skin, respiratory tract, and female reproductive tract.
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## Checkpoints
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- HF-Transformers checkpoint: [BGI-HangzhouAI/Genos-m-4.7B](https://huggingface.co/BGI-HangzhouAI/Genos-m-4.7B)
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- Megatron-LM checkpoint: [BGI-HangzhouAI/Genos-m-Megatron-4.7B](https://huggingface.co/BGI-HangzhouAI/Genos-m-Megatron-4.7B)
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## License
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Genos-m model and code are released under the Apache License 2.0.
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## Contact
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For questions and suggestions, please open an issue.
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config.json
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