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Model: zstanjj/HTML-Pruner-Phi-3.8B
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---
language:
- en
library_name: transformers
base_model: microsoft/Phi-3.5-mini-instruct
license: apache-2.0
---
## Model Information
We release the HTML pruner model used in **HtmlRAG: HTML is Better Than Plain Text for Modeling Retrieval Results in RAG Systems**.
<p align="left">
Useful links: 📝 <a href="https://arxiv.org/abs/2411.02959" target="_blank">Paper</a> • 🤗 <a href="https://huggingface.co/papers/2411.02959" target="_blank">Hugging Face</a> • 🧩 <a href="https://github.com/plageon/HtmlRAG" target="_blank">Github</a>
</p>
We propose HtmlRAG, which uses HTML instead of plain text as the format of external knowledge in RAG systems. To tackle the long context brought by HTML, we propose **Lossless HTML Cleaning** and **Two-Step Block-Tree-Based HTML Pruning**.
- **Lossless HTML Cleaning**: This cleaning process just removes totally irrelevant contents and compress redundant structures, retaining all semantic information in the original HTML. The compressed HTML of lossless HTML cleaning is suitable for RAG systems that have long-context LLMs and are not willing to loss any information before generation.
- **Two-Step Block-Tree-Based HTML Pruning**: The block-tree-based HTML pruning consists of two steps, both of which are conducted on the block tree structure. The first pruning step uses a embedding model to calculate scores for blocks, while the second step uses a path generative model. The first step processes the result of lossless HTML cleaning, while the second step processes the result of the first pruning step.
🌹 If you use this model, please ✨star our **[GitHub repository](https://github.com/plageon/HtmlRAG)** to support us. Your star means a lot!
## 📦 Installation
Install the package using pip:
```bash
pip install htmlrag
```
Or install the package from source:
```bash
pip install -e .
```
---
## 📖 User Guide
### 🧹 HTML Cleaning
```python
from htmlrag import clean_html
question = "When was the bellagio in las vegas built?"
html = """
<html>
<head>
<h1>Bellagio Hotel in Las</h1>
</head>
<body>
<p class="class0">The Bellagio is a luxury hotel and casino located on the Las Vegas Strip in Paradise, Nevada. It was built in 1998.</p>
</body>
<div>
<div>
<p>Some other text</p>
<p>Some other text</p>
</div>
</div>
<p class="class1"></p>
<!-- Some comment -->
<script type="text/javascript">
document.write("Hello World!");
</script>
</html>
"""
#. alternatively you can read html files and merge them
# html_files=["/path/to/html/file1.html", "/path/to/html/file2.html"]
# htmls=[open(file).read() for file in html_files]
# html = "\n".join(htmls)
simplified_html = clean_html(html)
print(simplified_html)
# <html>
# <h1>Bellagio Hotel in Las</h1>
# <p>The Bellagio is a luxury hotel and casino located on the Las Vegas Strip in Paradise, Nevada. It was built in 1998.</p>
# <div>
# <p>Some other text</p>
# <p>Some other text</p>
# </div>
# </html>
```
### 🔧 Configure Pruning Parameters
The example HTML document is rather a short one. Real-world HTML documents can be much longer and more complex. To handle such cases, we can configure the following parameters:
```python
# Maximum number of words in a node when constructing the block tree for pruning with the embedding model
MAX_NODE_WORDS_EMBED = 10
# MAX_NODE_WORDS_EMBED = 256 # a recommended setting for real-world HTML documents
# Maximum number of tokens in the output HTML document pruned with the embedding model
MAX_CONTEXT_WINDOW_EMBED = 60
# MAX_CONTEXT_WINDOW_EMBED = 6144 # a recommended setting for real-world HTML documents
# Maximum number of words in a node when constructing the block tree for pruning with the generative model
MAX_NODE_WORDS_GEN = 5
# MAX_NODE_WORDS_GEN = 128 # a recommended setting for real-world HTML documents
# Maximum number of tokens in the output HTML document pruned with the generative model
MAX_CONTEXT_WINDOW_GEN = 32
# MAX_CONTEXT_WINDOW_GEN = 4096 # a recommended setting for real-world HTML documents
```
### 🌲 Build Block Tree
```python
from htmlrag import build_block_tree
block_tree, simplified_html = build_block_tree(simplified_html, max_node_words=MAX_NODE_WORDS_EMBED)
# block_tree, simplified_html = build_block_tree(simplified_html, max_node_words=MAX_NODE_WORDS_GEN, zh_char=True) # for Chinese text
for block in block_tree:
print("Block Content: ", block[0])
print("Block Path: ", block[1])
print("Is Leaf: ", block[2])
print("")
# Block Content: <h1>Bellagio Hotel in Las</h1>
# Block Path: ['html', 'title']
# Is Leaf: True
#
# Block Content: <div>
# <p>Some other text</p>
# <p>Some other text</p>
# </div>
# Block Path: ['html', 'div']
# Is Leaf: True
#
# Block Content: <p>The Bellagio is a luxury hotel and casino located on the Las Vegas Strip in Paradise, Nevada. It was built in 1998.</p>
# Block Path: ['html', 'p']
# Is Leaf: True
```
### ✂️ Prune HTML Blocks with Embedding Model
```python
from htmlrag import EmbedHTMLPruner
embed_model="BAAI/bge-large-en"
query_instruction_for_retrieval = "Instruct: Given a web search query, retrieve relevant passages that answer the query\nQuery: "
embed_html_pruner = EmbedHTMLPruner(embed_model=embed_model, local_inference=True, query_instruction_for_retrieval = query_instruction_for_retrieval)
# alternatively you can init a remote TEI model, refer to https://github.com/huggingface/text-embeddings-inference.
# tei_endpoint="http://YOUR_TEI_ENDPOINT"
# embed_html_pruner = EmbedHTMLPruner(embed_model=embed_model, local_inference=False, query_instruction_for_retrieval = query_instruction_for_retrieval, endpoint=tei_endpoint)
block_rankings=embed_html_pruner.calculate_block_rankings(question, simplified_html, block_tree)
print(block_rankings)
# [2, 0, 1]
#. alternatively you can use bm25 to rank the blocks
from htmlrag import BM25HTMLPruner
bm25_html_pruner = BM25HTMLPruner()
block_rankings = bm25_html_pruner.calculate_block_rankings(question, simplified_html, block_tree)
print(block_rankings)
# [2, 0, 1]
from transformers import AutoTokenizer
chat_tokenizer = AutoTokenizer.from_pretrained("meta-llama/Llama-3.1-70B-Instruct")
pruned_html = embed_html_pruner.prune_HTML(simplified_html, block_tree, block_rankings, chat_tokenizer, MAX_CONTEXT_WINDOW_EMBED)
print(pruned_html)
# <html>
# <h1>Bellagio Hotel in Las</h1>
# <p>The Bellagio is a luxury hotel and casino located on the Las Vegas Strip in Paradise, Nevada. It was built in 1998.</p>
# </html>
```
### ✂️ Prune HTML Blocks with Generative Model
```python
from htmlrag import GenHTMLPruner
import torch
# construct a finer block tree
block_tree, pruned_html = build_block_tree(pruned_html, max_node_words=MAX_NODE_WORDS_GEN)
# block_tree, pruned_html = build_block_tree(pruned_html, max_node_words=MAX_NODE_WORDS_GEN, zh_char=True) # for Chinese text
for block in block_tree:
print("Block Content: ", block[0])
print("Block Path: ", block[1])
print("Is Leaf: ", block[2])
print("")
# Block Content: <h1>Bellagio Hotel in Las</h1>
# Block Path: ['html', 'title']
# Is Leaf: True
#
# Block Content: <p>The Bellagio is a luxury hotel and casino located on the Las Vegas Strip in Paradise, Nevada. It was built in 1998.</p>
# Block Path: ['html', 'p']
# Is Leaf: True
ckpt_path = "zstanjj/HTML-Pruner-Phi-3.8B"
if torch.cuda.is_available():
device="cuda"
else:
device="cpu"
gen_embed_pruner = GenHTMLPruner(gen_model=ckpt_path, device=device)
block_rankings = gen_embed_pruner.calculate_block_rankings(question, pruned_html, block_tree)
print(block_rankings)
# [1, 0]
pruned_html = gen_embed_pruner.prune_HTML(pruned_html, block_tree, block_rankings, chat_tokenizer, MAX_CONTEXT_WINDOW_GEN)
print(pruned_html)
# <p>The Bellagio is a luxury hotel and casino located on the Las Vegas Strip in Paradise, Nevada. It was built in 1998.</p>
```
---
## Results
- **Results for [HTML-Pruner-Phi-3.8B](https://huggingface.co/zstanjj/HTML-Pruner-Phi-3.8B) and [HTML-Pruner-Llama-1B](https://huggingface.co/zstanjj/HTML-Pruner-Llama-1B) with Llama-3.1-70B-Instruct as chat model**.
| Dataset | ASQA | HotpotQA | NQ | TriviaQA | MuSiQue | ELI5 |
|------------------|-----------|-----------|-----------|-----------|-----------|-----------|
| Metrics | EM | EM | EM | EM | EM | ROUGE-L |
| BM25 | 49.50 | 38.25 | 47.00 | 88.00 | 9.50 | 16.15 |
| BGE | 68.00 | 41.75 | 59.50 | 93.00 | 12.50 | 16.20 |
| E5-Mistral | 63.00 | 36.75 | 59.50 | 90.75 | 11.00 | 16.17 |
| LongLLMLingua | 62.50 | 45.00 | 56.75 | 92.50 | 10.25 | 15.84 |
| JinaAI Reader | 55.25 | 34.25 | 48.25 | 90.00 | 9.25 | 16.06 |
| HtmlRAG-Phi-3.8B | **68.50** | **46.25** | 60.50 | **93.50** | **13.25** | **16.33** |
| HtmlRAG-Llama-1B | 66.50 | 45.00 | **60.75** | 93.00 | 10.00 | 16.25 |
---
## 📜 Citation
```bibtex
@misc{tan2024htmlraghtmlbetterplain,
title={HtmlRAG: HTML is Better Than Plain Text for Modeling Retrieved Knowledge in RAG Systems},
author={Jiejun Tan and Zhicheng Dou and Wen Wang and Mang Wang and Weipeng Chen and Ji-Rong Wen},
year={2024},
eprint={2411.02959},
archivePrefix={arXiv},
primaryClass={cs.IR},
url={https://arxiv.org/abs/2411.02959},
}
```

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{
"_name_or_path": "Phi-3.5-mini-instruct",
"architectures": [
"Phi3ForCausalLM"
],
"attention_dropout": 0.0,
"auto_map": {
"AutoConfig": "configuration_phi3.Phi3Config",
"AutoModelForCausalLM": "modeling_phi3.Phi3ForCausalLM",
"AutoModelForSeq2SeqLM": "modeling_phi3.PHI3ForHTMLTreeGeneration"
},
"bos_token_id": 1,
"embd_pdrop": 0.0,
"eos_token_id": 32000,
"hidden_act": "silu",
"hidden_size": 3072,
"initializer_range": 0.02,
"intermediate_size": 8192,
"max_position_embeddings": 131072,
"model_type": "phi3",
"num_attention_heads": 32,
"num_hidden_layers": 32,
"num_key_value_heads": 32,
"original_max_position_embeddings": 4096,
"pad_token_id": 32000,
"resid_pdrop": 0.0,
"rms_norm_eps": 1e-05,
"rope_scaling": {
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64.52999877929688,
64.83999633789062
],
"short_factor": [
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"type": "longrope"
},
"rope_theta": 10000.0,
"sliding_window": 262144,
"tie_word_embeddings": false,
"torch_dtype": "bfloat16",
"transformers_version": "4.43.3",
"use_cache": true,
"attention_bias": false,
"vocab_size": 32064,
"attn_implementation": "flash_attention_2"
}

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{"framework":"Pytorch","task":"text-ranking"}

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# coding=utf-8
# Copyright 2024 Microsoft and the HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Phi-3 model configuration"""
from transformers.configuration_utils import PretrainedConfig
from transformers.utils import logging
logger = logging.get_logger(__name__)
PHI3_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"microsoft/Phi-3-mini-4k-instruct": "https://huggingface.co/microsoft/Phi-3-mini-4k-instruct/resolve/main/config.json",
"microsoft/Phi-3-mini-128k-instruct": "https://huggingface.co/microsoft/Phi-3-mini-128k-instruct/resolve/main/config.json",
}
class Phi3Config(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`Phi3Model`]. It is used to instantiate a Phi-3
model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the
[microsoft/Phi-3-mini-4k-instruct](https://huggingface.co/microsoft/Phi-3-mini-4k-instruct).
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 32064):
Vocabulary size of the Phi-3 model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`Phi3Model`].
hidden_size (`int`, *optional*, defaults to 3072):
Dimension of the hidden representations.
intermediate_size (`int`, *optional*, defaults to 8192):
Dimension of the MLP representations.
num_hidden_layers (`int`, *optional*, defaults to 32):
Number of hidden layers in the Transformer decoder.
num_attention_heads (`int`, *optional*, defaults to 32):
Number of attention heads for each attention layer in the Transformer decoder.
num_key_value_heads (`int`, *optional*):
This is the number of key_value heads that should be used to implement Grouped Query Attention. If
`num_key_value_heads=num_attention_heads`, the model will use Multi Head Attention (MHA), if
`num_key_value_heads=1 the model will use Multi Query Attention (MQA) otherwise GQA is used. When
converting a multi-head checkpoint to a GQA checkpoint, each group key and value head should be constructed
by meanpooling all the original heads within that group. For more details checkout [this
paper](https://arxiv.org/pdf/2305.13245.pdf). If it is not specified, will default to
`num_attention_heads`.
resid_pdrop (`float`, *optional*, defaults to 0.0):
Dropout probability for mlp outputs.
embd_pdrop (`int`, *optional*, defaults to 0.0):
The dropout ratio for the embeddings.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio after computing the attention scores.
hidden_act (`str` or `function`, *optional*, defaults to `"silu"`):
The non-linear activation function (function or string) in the decoder.
max_position_embeddings (`int`, *optional*, defaults to 4096):
The maximum sequence length that this model might ever be used with.
original_max_position_embeddings (`int`, *optional*, defaults to 4096):
The maximum sequence length that this model was trained with. This is used to determine the size of the
original RoPE embeddings when using long scaling.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
rms_norm_eps (`float`, *optional*, defaults to 1e-05):
The epsilon value used for the RMSNorm.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models). Only
relevant if `config.is_decoder=True`. Whether to tie weight embeddings or not.
tie_word_embeddings (`bool`, *optional*, defaults to `False`):
Whether to tie weight embeddings
rope_theta (`float`, *optional*, defaults to 10000.0):
The base period of the RoPE embeddings.
rope_scaling (`dict`, *optional*):
The scaling strategy for the RoPE embeddings. If `None`, no scaling is applied. If a dictionary, it must
contain the following keys: `type`, `short_factor` and `long_factor`. The `type` must be `longrope` and
the `short_factor` and `long_factor` must be lists of numbers with the same length as the hidden size
divided by the number of attention heads divided by 2.
bos_token_id (`int`, *optional*, defaults to 1):
The id of the "beginning-of-sequence" token.
eos_token_id (`int`, *optional*, defaults to 32000):
The id of the "end-of-sequence" token.
pad_token_id (`int`, *optional*, defaults to 32000):
The id of the padding token.
sliding_window (`int`, *optional*):
Sliding window attention window size. If `None`, no sliding window is applied.
Example:
```python
>>> from transformers import Phi3Model, Phi3Config
>>> # Initializing a Phi-3 style configuration
>>> configuration = Phi3Config.from_pretrained("microsoft/Phi-3-mini-4k-instruct")
>>> # Initializing a model from the configuration
>>> model = Phi3Model(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "phi3"
keys_to_ignore_at_inference = ["past_key_values"]
def __init__(
self,
vocab_size=32064,
hidden_size=3072,
intermediate_size=8192,
num_hidden_layers=32,
num_attention_heads=32,
num_key_value_heads=None,
resid_pdrop=0.0,
embd_pdrop=0.0,
attention_dropout=0.0,
hidden_act="silu",
max_position_embeddings=4096,
original_max_position_embeddings=4096,
initializer_range=0.02,
rms_norm_eps=1e-5,
use_cache=True,
tie_word_embeddings=False,
rope_theta=10000.0,
rope_scaling=None,
bos_token_id=1,
eos_token_id=32000,
pad_token_id=32000,
sliding_window=None,
**kwargs,
):
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.intermediate_size = intermediate_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
if num_key_value_heads is None:
num_key_value_heads = num_attention_heads
self.num_key_value_heads = num_key_value_heads
self.resid_pdrop = resid_pdrop
self.embd_pdrop = embd_pdrop
self.attention_dropout = attention_dropout
self.hidden_act = hidden_act
self.max_position_embeddings = max_position_embeddings
self.original_max_position_embeddings = original_max_position_embeddings
self.initializer_range = initializer_range
self.rms_norm_eps = rms_norm_eps
self.use_cache = use_cache
self.rope_theta = rope_theta
self.rope_scaling = rope_scaling
self._rope_scaling_adjustment()
self._rope_scaling_validation()
self.sliding_window = sliding_window
super().__init__(
bos_token_id=bos_token_id,
eos_token_id=eos_token_id,
pad_token_id=pad_token_id,
tie_word_embeddings=tie_word_embeddings,
**kwargs,
)
def _rope_scaling_adjustment(self):
"""
Adjust the `type` of the `rope_scaling` configuration for backward compatibility.
"""
if self.rope_scaling is None:
return
rope_scaling_type = self.rope_scaling.get("type", None)
# For backward compatibility if previous version used "su" or "yarn"
if rope_scaling_type is not None and rope_scaling_type in ["su", "yarn"]:
self.rope_scaling["type"] = "longrope"
def _rope_scaling_validation(self):
"""
Validate the `rope_scaling` configuration.
"""
if self.rope_scaling is None:
return
if not isinstance(self.rope_scaling, dict) or len(self.rope_scaling) != 3:
raise ValueError(
"`rope_scaling` must be a dictionary with three fields, `type`, `short_factor` and `long_factor`, "
f"got {self.rope_scaling}"
)
rope_scaling_type = self.rope_scaling.get("type", None)
rope_scaling_short_factor = self.rope_scaling.get("short_factor", None)
rope_scaling_long_factor = self.rope_scaling.get("long_factor", None)
if rope_scaling_type is None or rope_scaling_type not in ["longrope"]:
raise ValueError(f"`rope_scaling`'s type field must be one of ['longrope'], got {rope_scaling_type}")
if not (
isinstance(rope_scaling_short_factor, list)
and all(isinstance(x, (int, float)) for x in rope_scaling_short_factor)
):
raise ValueError(
f"`rope_scaling`'s short_factor field must be a list of numbers, got {rope_scaling_short_factor}"
)
if not len(rope_scaling_short_factor) == self.hidden_size // self.num_attention_heads // 2:
raise ValueError(
f"`rope_scaling`'s short_factor field must have length {self.hidden_size // self.num_attention_heads // 2}, got {len(rope_scaling_short_factor)}"
)
if not (
isinstance(rope_scaling_long_factor, list)
and all(isinstance(x, (int, float)) for x in rope_scaling_long_factor)
):
raise ValueError(
f"`rope_scaling`'s long_factor field must be a list of numbers, got {rope_scaling_long_factor}"
)
if not len(rope_scaling_long_factor) == self.hidden_size // self.num_attention_heads // 2:
raise ValueError(
f"`rope_scaling`'s long_factor field must have length {self.hidden_size // self.num_attention_heads // 2}, got {len(rope_scaling_long_factor)}"
)

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"bos_token_id": 1,
"eos_token_id": [
32007,
32001,
32000
],
"pad_token_id": 32000,
"transformers_version": "4.43.4"
}

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}

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import os
import torch
import logging
import transformers
import torch.distributed as dist
import torch
import math
# global var
_SEQUENCE_PARALLEL_GROUP = None
_SEQUENCE_PARALLEL_SIZE = 1
def init_logger(fpath='', local_rank=0):
if transformers.trainer_utils.is_main_process(local_rank):
if fpath:
if os.path.dirname(fpath):
os.makedirs(os.path.dirname(fpath), exist_ok=True)
file_handler = logging.FileHandler(fpath, mode='a') # to file
transformers.logging.add_handler(file_handler)
transformers.logging.set_verbosity_info()
else:
transformers.logging.set_verbosity_error() # reduce
transformers.logging.enable_explicit_format()
return transformers.logging.get_logger()
class DistributedSampler(torch.utils.data.distributed.DistributedSampler):
def set_epoch(self, epoch):
# 重载Sample 保证每个epoch dataset更新后sampler 重新更新
# If the dataset length is evenly divisible by # of replicas, then there
# is no need to drop any data, since the dataset will be split equally.
if self.drop_last and len(self.dataset) % self.num_replicas != 0: # type: ignore[arg-type]
# Split to nearest available length that is evenly divisible.
# This is to ensure each rank receives the same amount of data when
# using this Sampler.
self.num_samples = math.ceil(
(len(self.dataset) - self.num_replicas) / self.num_replicas # type: ignore[arg-type]
)
else:
self.num_samples = math.ceil(len(self.dataset) / self.num_replicas) # type: ignore[arg-type]
self.total_size = self.num_samples * self.num_replicas
super().set_epoch(epoch)
def add_custom_callback(trainer, logger):
if 'PrinterCallback' in trainer.callback_handler.callback_list:
trainer.pop_callback(transformers.PrinterCallback)
trainer.add_callback(LogCallback(logger))
logger.info('Add custom LogCallback')
trainer.add_callback(DatasetUpdateCallback(trainer))
logger.info('Add custom DatasetUpdateCallback')
trainer.add_callback(SaveDiskCallback())
logger.info('Add custom SaveDiskCallback')
logger.info(f"trainer's callbacks: {trainer.callback_handler.callback_list}")
class LogCallback(transformers.TrainerCallback):
"""
A bare :class:`~transformers.TrainerCallback` that just prints with logger.
"""
def __init__(self, logger, exclude=('total_flos', 'epoch')):
self.logger = logger
self.exclude = exclude
def on_log(self, args, state, control, logs=None, **kwargs):
if state.is_world_process_zero:
self.logger.info(''.join([
f"[global_steps={state.global_step}]",
f"[epochs={logs['epoch']}]",
','.join(f'{k}={v}' for k, v in logs.items()
if k not in self.exclude)
]))
class DatasetUpdateCallback(transformers.TrainerCallback):
def __init__(self, trainer):
self.trainer = trainer
def on_epoch_begin(self, args, state, control,train_dataloader, **kwargs):
self.trainer.train_dataset.update(int(state.epoch))
train_dataloader.sampler.set_epoch(int(state.epoch))
class SaveDiskCallback(transformers.TrainerCallback):
def on_save(self, args, state, control, **kwargs):
if args.local_rank != 0:
return
for ckpt in os.listdir(args.output_dir):
# remove out-of-date deepspeed checkpoints
if ckpt.startswith('checkpoint-') and not ckpt.endswith(f'-{state.global_step}'):
for pattern in ['global_step*', '*.pth']:
os.system("rm -rf " + os.path.join(args.output_dir, ckpt, pattern))
def on_train_end(self, args, state, control, **kwargs):
if state.is_local_process_zero and False:
for pattern in ['global_step*', '*.pth']:
os.system("rm -rf " + os.path.join(args.output_dir, "checkpoint-*", pattern))
def register_nan_hook(model):
torch.autograd.set_detect_anomaly(True)
def add_module_name(module):
for name, sub_module in module.named_modules():
sub_module.name = name
def add_check_nan_hook(module):
def check_nan(module, inputs, outputs):
any_nan = False
for i, tensor in enumerate(inputs):
if isinstance(tensor, torch.Tensor) and tensor.isnan().any():
print(f'module {module.name} contains nan in its {i}th input.')
any_nan = True
for i, tensor in enumerate(outputs):
if isinstance(tensor, torch.Tensor) and tensor.isnan().any():
print(f'module {module.name} contains nan in its {i}th output.')
any_nan = True
if any_nan:
if torch.distributed.get_rank() == 0:
torch.save({
'state_dict': module.state_dict(),
'inputs': inputs,
'outputs': outputs,
'type': module.__class__.__name__
}, module.name + '.pth')
# from ipdb import set_trace; set_trace()
# else:
# import time; time.sleep(10000)
module.register_forward_hook(lambda module, inputs, outputs: check_nan(module, inputs, outputs))
module.register_forward_hook(lambda module, inputs, outputs: check_nan(module, inputs, outputs))
model.apply(add_module_name)
model.apply(add_check_nan_hook)
def initialize_seq_parallel(
sequence_parallel_size,
):
if sequence_parallel_size <= 1:
return None
num_sequence_parallel_groups: int = dist.get_world_size() // sequence_parallel_size
global _SEQUENCE_PARALLEL_GROUP
global _SEQUENCE_PARALLEL_SIZE
_SEQUENCE_PARALLEL_SIZE = sequence_parallel_size
for i in range(num_sequence_parallel_groups):
ranks = range(i * sequence_parallel_size,
(i + 1) * sequence_parallel_size)
group = torch.distributed.new_group(ranks)
if dist.get_rank() in ranks:
_SEQUENCE_PARALLEL_GROUP = group
def get_sequence_parallel_group():
"""Get the sequence parallel group the caller rank belongs to."""
return _SEQUENCE_PARALLEL_GROUP
def get_sequence_parallel_size():
return _SEQUENCE_PARALLEL_SIZE
def get_sequence_parallel_rank():
return torch.distributed.get_rank(group=get_sequence_parallel_group())
# 设置序列并行参数来保证优化器正确平均
from deepspeed.utils import groups
groups._get_sequence_parallel_world_size = get_sequence_parallel_size

30
special_tokens_map.json Normal file
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{
"bos_token": {
"content": "<s>",
"lstrip": false,
"normalized": false,
"rstrip": false,
"single_word": false
},
"eos_token": {
"content": "<|endoftext|>",
"lstrip": false,
"normalized": false,
"rstrip": false,
"single_word": false
},
"pad_token": {
"content": "<|endoftext|>",
"lstrip": false,
"normalized": false,
"rstrip": false,
"single_word": false
},
"unk_token": {
"content": "<unk>",
"lstrip": false,
"normalized": false,
"rstrip": false,
"single_word": false
}
}

3
tokenizer.model Normal file
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version https://git-lfs.github.com/spec/v1
oid sha256:9e556afd44213b6bd1be2b850ebbbd98f5481437a8021afaf58ee7fb1818d347
size 499723

132
tokenizer_config.json Normal file
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{
"add_bos_token": false,
"add_eos_token": false,
"add_prefix_space": true,
"added_tokens_decoder": {
"0": {
"content": "<unk>",
"lstrip": false,
"normalized": false,
"rstrip": false,
"single_word": false,
"special": true
},
"1": {
"content": "<s>",
"lstrip": false,
"normalized": false,
"rstrip": false,
"single_word": false,
"special": true
},
"2": {
"content": "</s>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": false
},
"32000": {
"content": "<|endoftext|>",
"lstrip": false,
"normalized": false,
"rstrip": false,
"single_word": false,
"special": true
},
"32001": {
"content": "<|assistant|>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": true
},
"32002": {
"content": "<|placeholder1|>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": true
},
"32003": {
"content": "<|placeholder2|>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": true
},
"32004": {
"content": "<|placeholder3|>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": true
},
"32005": {
"content": "<|placeholder4|>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": true
},
"32006": {
"content": "<|system|>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": true
},
"32007": {
"content": "<|end|>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": true
},
"32008": {
"content": "<|placeholder5|>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": true
},
"32009": {
"content": "<|placeholder6|>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": true
},
"32010": {
"content": "<|user|>",
"lstrip": false,
"normalized": false,
"rstrip": true,
"single_word": false,
"special": true
}
},
"bos_token": "<s>",
"chat_template": "{% for message in messages %}{% if message['role'] == 'system' and message['content'] %}{{'<|system|>\n' + message['content'] + '<|end|>\n'}}{% elif message['role'] == 'user' %}{{'<|user|>\n' + message['content'] + '<|end|>\n'}}{% elif message['role'] == 'assistant' %}{{'<|assistant|>\n' + message['content'] + '<|end|>\n'}}{% endif %}{% endfor %}{% if add_generation_prompt %}{{ '<|assistant|>\n' }}{% else %}{{ eos_token }}{% endif %}",
"clean_up_tokenization_spaces": false,
"eos_token": "<|endoftext|>",
"legacy": false,
"model_max_length": 35000,
"pad_token": "<|endoftext|>",
"padding_side": "left",
"sp_model_kwargs": {},
"spaces_between_special_tokens": false,
"tokenizer_class": "LlamaTokenizer",
"unk_token": "<unk>",
"use_default_system_prompt": false
}

106
tree_gen_utils.py Normal file
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from collections import defaultdict
from typing import List, Tuple
import numpy as np
from anytree import Node, RenderTree
import bs4
from anytree import PreOrderIter
from anytree.exporter import DotExporter
def nodenamefunc(node):
return f"{node.name}|{node.prob}|{node.input_ids}"
class TokenDotExporter(DotExporter):
def __init__(self, node, **kwargs):
super().__init__(node, **kwargs)
def __iter__(self):
# prepare
indent = " " * self.indent
nodenamefunc = self.nodenamefunc or self._default_nodenamefunc
nodeattrfunc = self.nodeattrfunc or self._default_nodeattrfunc
edgeattrfunc = self.edgeattrfunc or self._default_edgeattrfunc
edgetypefunc = self.edgetypefunc or self._default_edgetypefunc
filter_ = self.filter_ or self._default_filter
return self.__iter(indent, nodenamefunc, nodeattrfunc, edgeattrfunc, edgetypefunc, filter_)
def __iter_nodes(self, indent, nodenamefunc, nodeattrfunc, filter_):
for node in PreOrderIter(self.node, filter_=filter_, stop=self.stop, maxlevel=self.maxlevel):
nodename = nodenamefunc(node)
nodeattr = nodeattrfunc(node)
nodeattr = " {%s}" % nodeattr if nodeattr is not None else ""
yield '%s%s' % (DotExporter.esc(nodename), nodeattr)
def __iter(self, indent, nodenamefunc, nodeattrfunc, edgeattrfunc, edgetypefunc, filter_):
for node in self.__iter_nodes(indent, nodenamefunc, nodeattrfunc, filter_):
yield node
class TokenIdNode(Node):
def __init__(self, name, parent=None, children=None, **kwargs):
super().__init__(name, parent, children, **kwargs)
self.input_ids = kwargs.get('input_ids', [])
self.prob = kwargs.get('prob', np.float32(0.0))
def split_tree(soup: bs4.BeautifulSoup, max_node_words=0) -> List[Tuple[bs4.element.Tag, List[str], bool]]:
word_count = len(soup.get_text().split())
if word_count > max_node_words:
possible_trees = [(soup, [])]
target_trees = [] # [(tag, path, is_leaf)]
# split the entire dom tee into subtrees, until the length of the subtree is less than max_node_words words
# find all possible trees
while True:
if len(possible_trees) == 0:
break
tree = possible_trees.pop(0)
tag_children = defaultdict(int)
bare_word_count = 0
# count child tags
for child in tree[0].contents:
if isinstance(child, bs4.element.Tag):
tag_children[child.name] += 1
_tag_children = {k: 0 for k in tag_children.keys()}
# check if the tree can be split
for child in tree[0].contents:
if isinstance(child, bs4.element.Tag):
# change child tag with duplicate names
if tag_children[child.name] > 1:
new_name = f"{child.name}{_tag_children[child.name]}"
new_tree = (child, tree[1] + [new_name])
_tag_children[child.name] += 1
child.name = new_name
else:
new_tree = (child, tree[1] + [child.name])
word_count = len(child.get_text().split())
# add node with more than max_node_words words, and recursion depth is less than 64
if word_count > max_node_words and len(new_tree[1]) < 64:
possible_trees.append(new_tree)
else:
target_trees.append((new_tree[0], new_tree[1], True))
else:
bare_word_count += len(str(child).split())
# add leaf node
if len(tag_children) == 0:
target_trees.append((tree[0], tree[1], True))
# add node with more than max_node_words bare words
elif bare_word_count > max_node_words:
target_trees.append((tree[0], tree[1], False))
else:
soup_children = [c for c in soup.contents if isinstance(c, bs4.element.Tag)]
if len(soup_children) == 1:
target_trees = [(soup_children[0], [soup_children[0].name], True)]
else:
# add an html tag to wrap all children
new_soup = bs4.BeautifulSoup("", 'html.parser')
new_tag = new_soup.new_tag("html")
new_soup.append(new_tag)
for child in soup_children:
new_tag.append(child)
target_trees = [(new_tag, ["html"], True)]
return target_trees

604
zero_to_fp32.py Normal file
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#!/usr/bin/env python
# Copyright (c) Microsoft Corporation.
# SPDX-License-Identifier: Apache-2.0
# DeepSpeed Team
# This script extracts fp32 consolidated weights from a zero 1, 2 and 3 DeepSpeed checkpoints. It gets
# copied into the top level checkpoint dir, so the user can easily do the conversion at any point in
# the future. Once extracted, the weights don't require DeepSpeed and can be used in any
# application.
#
# example: python zero_to_fp32.py . pytorch_model.bin
import argparse
import torch
import glob
import math
import os
import re
from collections import OrderedDict
from dataclasses import dataclass
# while this script doesn't use deepspeed to recover data, since the checkpoints are pickled with
# DeepSpeed data structures it has to be available in the current python environment.
from deepspeed.utils import logger
from deepspeed.checkpoint.constants import (DS_VERSION, OPTIMIZER_STATE_DICT, SINGLE_PARTITION_OF_FP32_GROUPS,
FP32_FLAT_GROUPS, ZERO_STAGE, PARTITION_COUNT, PARAM_SHAPES, BUFFER_NAMES,
FROZEN_PARAM_SHAPES, FROZEN_PARAM_FRAGMENTS)
@dataclass
class zero_model_state:
buffers: dict()
param_shapes: dict()
shared_params: list
ds_version: int
frozen_param_shapes: dict()
frozen_param_fragments: dict()
debug = 0
# load to cpu
device = torch.device('cpu')
def atoi(text):
return int(text) if text.isdigit() else text
def natural_keys(text):
'''
alist.sort(key=natural_keys) sorts in human order
http://nedbatchelder.com/blog/200712/human_sorting.html
(See Toothy's implementation in the comments)
'''
return [atoi(c) for c in re.split(r'(\d+)', text)]
def get_model_state_file(checkpoint_dir, zero_stage):
if not os.path.isdir(checkpoint_dir):
raise FileNotFoundError(f"Directory '{checkpoint_dir}' doesn't exist")
# there should be only one file
if zero_stage <= 2:
file = os.path.join(checkpoint_dir, "mp_rank_00_model_states.pt")
elif zero_stage == 3:
file = os.path.join(checkpoint_dir, "zero_pp_rank_0_mp_rank_00_model_states.pt")
if not os.path.exists(file):
raise FileNotFoundError(f"can't find model states file at '{file}'")
return file
def get_checkpoint_files(checkpoint_dir, glob_pattern):
# XXX: need to test that this simple glob rule works for multi-node setup too
ckpt_files = sorted(glob.glob(os.path.join(checkpoint_dir, glob_pattern)), key=natural_keys)
if len(ckpt_files) == 0:
raise FileNotFoundError(f"can't find {glob_pattern} files in directory '{checkpoint_dir}'")
return ckpt_files
def get_optim_files(checkpoint_dir):
return get_checkpoint_files(checkpoint_dir, "*_optim_states.pt")
def get_model_state_files(checkpoint_dir):
return get_checkpoint_files(checkpoint_dir, "*_model_states.pt")
def parse_model_states(files):
zero_model_states = []
for file in files:
state_dict = torch.load(file, map_location=device)
if BUFFER_NAMES not in state_dict:
raise ValueError(f"{file} is not a model state checkpoint")
buffer_names = state_dict[BUFFER_NAMES]
if debug:
print("Found buffers:", buffer_names)
# recover just the buffers while restoring them to fp32 if they were saved in fp16
buffers = {k: v.float() for k, v in state_dict["module"].items() if k in buffer_names}
param_shapes = state_dict[PARAM_SHAPES]
# collect parameters that are included in param_shapes
param_names = []
for s in param_shapes:
for name in s.keys():
param_names.append(name)
# update with frozen parameters
frozen_param_shapes = state_dict.get(FROZEN_PARAM_SHAPES, None)
if frozen_param_shapes is not None:
if debug:
print(f"Found frozen_param_shapes: {frozen_param_shapes}")
param_names += list(frozen_param_shapes.keys())
# handle shared params
shared_params = [[k, v] for k, v in state_dict["shared_params"].items()]
ds_version = state_dict.get(DS_VERSION, None)
frozen_param_fragments = state_dict.get(FROZEN_PARAM_FRAGMENTS, None)
z_model_state = zero_model_state(buffers=buffers,
param_shapes=param_shapes,
shared_params=shared_params,
ds_version=ds_version,
frozen_param_shapes=frozen_param_shapes,
frozen_param_fragments=frozen_param_fragments)
zero_model_states.append(z_model_state)
return zero_model_states
def parse_optim_states(files, ds_checkpoint_dir):
total_files = len(files)
state_dicts = []
for f in files:
state_dict = torch.load(f, map_location=device)
# immediately discard the potentially huge 2 optimizer states as we only care for fp32 master weights
# and also handle the case where it was already removed by another helper script
state_dict["optimizer_state_dict"].pop("optimizer_state_dict", None)
state_dicts.append(state_dict)
if not ZERO_STAGE in state_dicts[0][OPTIMIZER_STATE_DICT]:
raise ValueError(f"{files[0]} is not a zero checkpoint")
zero_stage = state_dicts[0][OPTIMIZER_STATE_DICT][ZERO_STAGE]
world_size = state_dicts[0][OPTIMIZER_STATE_DICT][PARTITION_COUNT]
# For ZeRO-2 each param group can have different partition_count as data parallelism for expert
# parameters can be different from data parallelism for non-expert parameters. So we can just
# use the max of the partition_count to get the dp world_size.
if type(world_size) is list:
world_size = max(world_size)
if world_size != total_files:
raise ValueError(
f"Expected {world_size} of '*_optim_states.pt' under '{ds_checkpoint_dir}' but found {total_files} files. "
"Possibly due to an overwrite of an old checkpoint, or a checkpoint didn't get saved by one or more processes."
)
# the groups are named differently in each stage
if zero_stage <= 2:
fp32_groups_key = SINGLE_PARTITION_OF_FP32_GROUPS
elif zero_stage == 3:
fp32_groups_key = FP32_FLAT_GROUPS
else:
raise ValueError(f"unknown zero stage {zero_stage}")
if zero_stage <= 2:
fp32_flat_groups = [state_dicts[i][OPTIMIZER_STATE_DICT][fp32_groups_key] for i in range(len(state_dicts))]
elif zero_stage == 3:
# if there is more than one param group, there will be multiple flattened tensors - one
# flattened tensor per group - for simplicity merge them into a single tensor
#
# XXX: could make the script more memory efficient for when there are multiple groups - it
# will require matching the sub-lists of param_shapes for each param group flattened tensor
fp32_flat_groups = [
torch.cat(state_dicts[i][OPTIMIZER_STATE_DICT][fp32_groups_key], 0) for i in range(len(state_dicts))
]
return zero_stage, world_size, fp32_flat_groups
def _get_fp32_state_dict_from_zero_checkpoint(ds_checkpoint_dir, exclude_frozen_parameters):
"""
Returns fp32 state_dict reconstructed from ds checkpoint
Args:
- ``ds_checkpoint_dir``: path to the deepspeed checkpoint folder (where the optimizer files are)
"""
print(f"Processing zero checkpoint '{ds_checkpoint_dir}'")
optim_files = get_optim_files(ds_checkpoint_dir)
zero_stage, world_size, fp32_flat_groups = parse_optim_states(optim_files, ds_checkpoint_dir)
print(f"Detected checkpoint of type zero stage {zero_stage}, world_size: {world_size}")
model_files = get_model_state_files(ds_checkpoint_dir)
zero_model_states = parse_model_states(model_files)
print(f'Parsing checkpoint created by deepspeed=={zero_model_states[0].ds_version}')
if zero_stage <= 2:
return _get_fp32_state_dict_from_zero2_checkpoint(world_size, fp32_flat_groups, zero_model_states,
exclude_frozen_parameters)
elif zero_stage == 3:
return _get_fp32_state_dict_from_zero3_checkpoint(world_size, fp32_flat_groups, zero_model_states,
exclude_frozen_parameters)
def _zero2_merge_frozen_params(state_dict, zero_model_states):
if zero_model_states[0].frozen_param_shapes is None or len(zero_model_states[0].frozen_param_shapes) == 0:
return
frozen_param_shapes = zero_model_states[0].frozen_param_shapes
frozen_param_fragments = zero_model_states[0].frozen_param_fragments
if debug:
num_elem = sum(s.numel() for s in frozen_param_shapes.values())
print(f'rank 0: {FROZEN_PARAM_SHAPES}.numel = {num_elem}')
wanted_params = len(frozen_param_shapes)
wanted_numel = sum(s.numel() for s in frozen_param_shapes.values())
avail_numel = sum([p.numel() for p in frozen_param_fragments.values()])
print(f'Frozen params: Have {avail_numel} numels to process.')
print(f'Frozen params: Need {wanted_numel} numels in {wanted_params} params')
total_params = 0
total_numel = 0
for name, shape in frozen_param_shapes.items():
total_params += 1
unpartitioned_numel = shape.numel()
total_numel += unpartitioned_numel
state_dict[name] = frozen_param_fragments[name]
if debug:
print(f"{name} full shape: {shape} unpartitioned numel {unpartitioned_numel} ")
print(f"Reconstructed Frozen fp32 state dict with {total_params} params {total_numel} elements")
def _has_callable(obj, fn):
attr = getattr(obj, fn, None)
return callable(attr)
def _zero2_merge_trainable_params(state_dict, world_size, fp32_flat_groups, zero_model_states):
param_shapes = zero_model_states[0].param_shapes
# Reconstruction protocol:
#
# XXX: document this
if debug:
for i in range(world_size):
for j in range(len(fp32_flat_groups[0])):
print(f"{FP32_FLAT_GROUPS}[{i}][{j}].shape={fp32_flat_groups[i][j].shape}")
# XXX: memory usage doubles here (zero2)
num_param_groups = len(fp32_flat_groups[0])
merged_single_partition_of_fp32_groups = []
for i in range(num_param_groups):
merged_partitions = [sd[i] for sd in fp32_flat_groups]
full_single_fp32_vector = torch.cat(merged_partitions, 0)
merged_single_partition_of_fp32_groups.append(full_single_fp32_vector)
avail_numel = sum(
[full_single_fp32_vector.numel() for full_single_fp32_vector in merged_single_partition_of_fp32_groups])
if debug:
wanted_params = sum([len(shapes) for shapes in param_shapes])
wanted_numel = sum([sum(shape.numel() for shape in shapes.values()) for shapes in param_shapes])
# not asserting if there is a mismatch due to possible padding
print(f"Have {avail_numel} numels to process.")
print(f"Need {wanted_numel} numels in {wanted_params} params.")
# params
# XXX: for huge models that can't fit into the host's RAM we will have to recode this to support
# out-of-core computing solution
total_numel = 0
total_params = 0
for shapes, full_single_fp32_vector in zip(param_shapes, merged_single_partition_of_fp32_groups):
offset = 0
avail_numel = full_single_fp32_vector.numel()
for name, shape in shapes.items():
unpartitioned_numel = shape.numel() if _has_callable(shape, 'numel') else math.prod(shape)
total_numel += unpartitioned_numel
total_params += 1
if debug:
print(f"{name} full shape: {shape} unpartitioned numel {unpartitioned_numel} ")
state_dict[name] = full_single_fp32_vector.narrow(0, offset, unpartitioned_numel).view(shape)
offset += unpartitioned_numel
# Z2 started to align to 2*world_size to improve nccl performance. Therefore both offset and
# avail_numel can differ by anywhere between 0..2*world_size. Due to two unrelated complex
# paddings performed in the code it's almost impossible to predict the exact numbers w/o the
# live optimizer object, so we are checking that the numbers are within the right range
align_to = 2 * world_size
def zero2_align(x):
return align_to * math.ceil(x / align_to)
if debug:
print(f"original offset={offset}, avail_numel={avail_numel}")
offset = zero2_align(offset)
avail_numel = zero2_align(avail_numel)
if debug:
print(f"aligned offset={offset}, avail_numel={avail_numel}")
# Sanity check
if offset != avail_numel:
raise ValueError(f"consumed {offset} numels out of {avail_numel} - something is wrong")
print(f"Reconstructed fp32 state dict with {total_params} params {total_numel} elements")
def _get_fp32_state_dict_from_zero2_checkpoint(world_size, fp32_flat_groups, zero_model_states,
exclude_frozen_parameters):
state_dict = OrderedDict()
# buffers
buffers = zero_model_states[0].buffers
state_dict.update(buffers)
if debug:
print(f"added {len(buffers)} buffers")
if not exclude_frozen_parameters:
_zero2_merge_frozen_params(state_dict, zero_model_states)
_zero2_merge_trainable_params(state_dict, world_size, fp32_flat_groups, zero_model_states)
# recover shared parameters
for pair in zero_model_states[0].shared_params:
if pair[1] in state_dict:
state_dict[pair[0]] = state_dict[pair[1]]
return state_dict
def zero3_partitioned_param_info(unpartitioned_numel, world_size):
remainder = unpartitioned_numel % world_size
padding_numel = (world_size - remainder) if remainder else 0
partitioned_numel = math.ceil(unpartitioned_numel / world_size)
return partitioned_numel, padding_numel
def _zero3_merge_frozen_params(state_dict, world_size, zero_model_states):
if zero_model_states[0].frozen_param_shapes is None or len(zero_model_states[0].frozen_param_shapes) == 0:
return
if debug:
for i in range(world_size):
num_elem = sum(s.numel() for s in zero_model_states[i].frozen_param_fragments.values())
print(f'rank {i}: {FROZEN_PARAM_SHAPES}.numel = {num_elem}')
frozen_param_shapes = zero_model_states[0].frozen_param_shapes
wanted_params = len(frozen_param_shapes)
wanted_numel = sum(s.numel() for s in frozen_param_shapes.values())
avail_numel = sum([p.numel() for p in zero_model_states[0].frozen_param_fragments.values()]) * world_size
print(f'Frozen params: Have {avail_numel} numels to process.')
print(f'Frozen params: Need {wanted_numel} numels in {wanted_params} params')
total_params = 0
total_numel = 0
for name, shape in zero_model_states[0].frozen_param_shapes.items():
total_params += 1
unpartitioned_numel = shape.numel()
total_numel += unpartitioned_numel
param_frags = tuple(model_state.frozen_param_fragments[name] for model_state in zero_model_states)
state_dict[name] = torch.cat(param_frags, 0).narrow(0, 0, unpartitioned_numel).view(shape)
partitioned_numel, partitioned_padding_numel = zero3_partitioned_param_info(unpartitioned_numel, world_size)
if debug:
print(
f"Frozen params: {total_params} {name} full shape: {shape} partition0 numel={partitioned_numel} partitioned_padding_numel={partitioned_padding_numel}"
)
print(f"Reconstructed Frozen fp32 state dict with {total_params} params {total_numel} elements")
def _zero3_merge_trainable_params(state_dict, world_size, fp32_flat_groups, zero_model_states):
param_shapes = zero_model_states[0].param_shapes
avail_numel = fp32_flat_groups[0].numel() * world_size
# Reconstruction protocol: For zero3 we need to zip the partitions together at boundary of each
# param, re-consolidating each param, while dealing with padding if any
# merge list of dicts, preserving order
param_shapes = {k: v for d in param_shapes for k, v in d.items()}
if debug:
for i in range(world_size):
print(f"{FP32_FLAT_GROUPS}[{i}].shape={fp32_flat_groups[i].shape}")
wanted_params = len(param_shapes)
wanted_numel = sum(shape.numel() for shape in param_shapes.values())
# not asserting if there is a mismatch due to possible padding
avail_numel = fp32_flat_groups[0].numel() * world_size
print(f"Trainable params: Have {avail_numel} numels to process.")
print(f"Trainable params: Need {wanted_numel} numels in {wanted_params} params.")
# params
# XXX: for huge models that can't fit into the host's RAM we will have to recode this to support
# out-of-core computing solution
offset = 0
total_numel = 0
total_params = 0
for name, shape in param_shapes.items():
unpartitioned_numel = shape.numel()
total_numel += unpartitioned_numel
total_params += 1
partitioned_numel, partitioned_padding_numel = zero3_partitioned_param_info(unpartitioned_numel, world_size)
if debug:
print(
f"Trainable params: {total_params} {name} full shape: {shape} partition0 numel={partitioned_numel} partitioned_padding_numel={partitioned_padding_numel}"
)
# XXX: memory usage doubles here
state_dict[name] = torch.cat(
tuple(fp32_flat_groups[i].narrow(0, offset, partitioned_numel) for i in range(world_size)),
0).narrow(0, 0, unpartitioned_numel).view(shape)
offset += partitioned_numel
offset *= world_size
# Sanity check
if offset != avail_numel:
raise ValueError(f"consumed {offset} numels out of {avail_numel} - something is wrong")
print(f"Reconstructed Trainable fp32 state dict with {total_params} params {total_numel} elements")
def _get_fp32_state_dict_from_zero3_checkpoint(world_size, fp32_flat_groups, zero_model_states,
exclude_frozen_parameters):
state_dict = OrderedDict()
# buffers
buffers = zero_model_states[0].buffers
state_dict.update(buffers)
if debug:
print(f"added {len(buffers)} buffers")
if not exclude_frozen_parameters:
_zero3_merge_frozen_params(state_dict, world_size, zero_model_states)
_zero3_merge_trainable_params(state_dict, world_size, fp32_flat_groups, zero_model_states)
# recover shared parameters
for pair in zero_model_states[0].shared_params:
if pair[1] in state_dict:
state_dict[pair[0]] = state_dict[pair[1]]
return state_dict
def get_fp32_state_dict_from_zero_checkpoint(checkpoint_dir, tag=None, exclude_frozen_parameters=False):
"""
Convert ZeRO 2 or 3 checkpoint into a single fp32 consolidated state_dict that can be loaded with
``load_state_dict()`` and used for training without DeepSpeed or shared with others, for example
via a model hub.
Args:
- ``checkpoint_dir``: path to the desired checkpoint folder
- ``tag``: checkpoint tag used as a unique identifier for checkpoint. If not provided will attempt to load tag in 'latest' file. e.g., ``global_step14``
- ``exclude_frozen_parameters``: exclude frozen parameters
Returns:
- pytorch ``state_dict``
Note: this approach may not work if your application doesn't have sufficient free CPU memory and
you may need to use the offline approach using the ``zero_to_fp32.py`` script that is saved with
the checkpoint.
A typical usage might be ::
from deepspeed.utils.zero_to_fp32 import get_fp32_state_dict_from_zero_checkpoint
# do the training and checkpoint saving
state_dict = get_fp32_state_dict_from_zero_checkpoint(checkpoint_dir) # already on cpu
model = model.cpu() # move to cpu
model.load_state_dict(state_dict)
# submit to model hub or save the model to share with others
In this example the ``model`` will no longer be usable in the deepspeed context of the same
application. i.e. you will need to re-initialize the deepspeed engine, since
``model.load_state_dict(state_dict)`` will remove all the deepspeed magic from it.
If you want it all done for you, use ``load_state_dict_from_zero_checkpoint`` instead.
"""
if tag is None:
latest_path = os.path.join(checkpoint_dir, 'latest')
if os.path.isfile(latest_path):
with open(latest_path, 'r') as fd:
tag = fd.read().strip()
else:
raise ValueError(f"Unable to find 'latest' file at {latest_path}")
ds_checkpoint_dir = os.path.join(checkpoint_dir, tag)
if not os.path.isdir(ds_checkpoint_dir):
raise FileNotFoundError(f"Directory '{ds_checkpoint_dir}' doesn't exist")
return _get_fp32_state_dict_from_zero_checkpoint(ds_checkpoint_dir, exclude_frozen_parameters)
def convert_zero_checkpoint_to_fp32_state_dict(checkpoint_dir, output_file, tag=None, exclude_frozen_parameters=False):
"""
Convert ZeRO 2 or 3 checkpoint into a single fp32 consolidated ``state_dict`` file that can be
loaded with ``torch.load(file)`` + ``load_state_dict()`` and used for training without DeepSpeed.
Args:
- ``checkpoint_dir``: path to the desired checkpoint folder. (one that contains the tag-folder, like ``global_step14``)
- ``output_file``: path to the pytorch fp32 state_dict output file (e.g. path/pytorch_model.bin)
- ``tag``: checkpoint tag used as a unique identifier for checkpoint. If not provided will attempt to load tag in the file named ``latest`` in the checkpoint folder, e.g., ``global_step14``
- ``exclude_frozen_parameters``: exclude frozen parameters
"""
state_dict = get_fp32_state_dict_from_zero_checkpoint(checkpoint_dir, tag, exclude_frozen_parameters)
print(f"Saving fp32 state dict to {output_file}")
torch.save(state_dict, output_file)
def load_state_dict_from_zero_checkpoint(model, checkpoint_dir, tag=None):
"""
1. Put the provided model to cpu
2. Convert ZeRO 2 or 3 checkpoint into a single fp32 consolidated ``state_dict``
3. Load it into the provided model
Args:
- ``model``: the model object to update
- ``checkpoint_dir``: path to the desired checkpoint folder. (one that contains the tag-folder, like ``global_step14``)
- ``tag``: checkpoint tag used as a unique identifier for checkpoint. If not provided will attempt to load tag in the file named ``latest`` in the checkpoint folder, e.g., ``global_step14``
Returns:
- ``model`: modified model
Make sure you have plenty of CPU memory available before you call this function. If you don't
have enough use the ``zero_to_fp32.py`` utility to do the conversion. You will find it
conveniently placed for you in the checkpoint folder.
A typical usage might be ::
from deepspeed.utils.zero_to_fp32 import load_state_dict_from_zero_checkpoint
model = load_state_dict_from_zero_checkpoint(trainer.model, checkpoint_dir)
# submit to model hub or save the model to share with others
Note, that once this was run, the ``model`` will no longer be usable in the deepspeed context
of the same application. i.e. you will need to re-initialize the deepspeed engine, since
``model.load_state_dict(state_dict)`` will remove all the deepspeed magic from it.
"""
logger.info(f"Extracting fp32 weights")
state_dict = get_fp32_state_dict_from_zero_checkpoint(checkpoint_dir, tag)
logger.info(f"Overwriting model with fp32 weights")
model = model.cpu()
model.load_state_dict(state_dict, strict=False)
return model
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument("checkpoint_dir",
type=str,
help="path to the desired checkpoint folder, e.g., path/checkpoint-12")
parser.add_argument(
"output_file",
type=str,
help="path to the pytorch fp32 state_dict output file (e.g. path/checkpoint-12/pytorch_model.bin)")
parser.add_argument("-t",
"--tag",
type=str,
default=None,
help="checkpoint tag used as a unique identifier for checkpoint. e.g., global_step1")
parser.add_argument("--exclude_frozen_parameters", action='store_true', help="exclude frozen parameters")
parser.add_argument("-d", "--debug", action='store_true', help="enable debug")
args = parser.parse_args()
debug = args.debug
convert_zero_checkpoint_to_fp32_state_dict(args.checkpoint_dir,
args.output_file,
tag=args.tag,
exclude_frozen_parameters=args.exclude_frozen_parameters)