--- license: llama3.1 base_model: meta-llama/Llama-3.1-8B-Instruct tags: - poster-extraction - scientific-posters - machine-actionable - FAIR-data - biomedical - document-understanding - structured-extraction - datacite - text-generation - llama3 language: - en pipeline_tag: text-generation library_name: transformers --- # Llama-3.1-8B-Poster-Extraction ## Model Description This model powers the extraction pipeline for [**posters.science**](https://posters.science), a platform for making scientific conference posters Findable, Accessible, Interoperable, and Reusable (FAIR). The model converts raw poster text into structured JSON metadata conforming to the [**poster-json-schema**](https://github.com/fairdataihub/poster-json-schema)—a DataCite-based schema extended for poster-specific metadata including conference information, content sections, and figure/table captions. Developed by the [**FAIR Data Innovations Hub**](https://fairdataihub.org/) at the California Medical Innovations Institute (CalMI²). ## poster2json Library This model is the core of the **poster2json** Python library: | Resource | Link | |----------|------| | **PyPI** | [poster2json](https://pypi.org/project/poster2json/) | | **Documentation** | [fairdataihub.github.io/poster2json](https://fairdataihub.github.io/poster2json/) | | **GitHub** | [fairdataihub/poster2json](https://github.com/fairdataihub/poster2json) | | **API Repository** | [fairdataihub/posters-science-extraction-api](https://github.com/fairdataihub/posters-science-extraction-api) | | **Platform** | [posters.science](https://posters.science) | ### Quick Install ```bash pip install poster2json ``` ### Python Usage ```python from poster2json import extract_poster result = extract_poster("path/to/poster.pdf") print(result["titles"][0]["title"]) print(result["creators"]) ``` ## Output Schema Output conforms to the [poster-json-schema](https://github.com/fairdataihub/poster-json-schema), based on [DataCite Metadata Schema](https://datacite.org/) with poster-specific extensions: ```json { "$schema": "https://posters.science/schema/v0.1/poster_schema.json", "creators": [ { "name": "Garcia, Sofia", "givenName": "Sofia", "familyName": "Garcia", "nameType": "Personal", "affiliation": ["University of California, San Diego"] } ], "titles": [ { "title": "Machine Learning Approaches to Diabetic Retinopathy Detection" } ], "publicationYear": 2025, "subjects": [ { "subject": "Machine Learning" }, { "subject": "Diabetic Retinopathy" } ], "descriptions": [ { "description": "This poster presents machine learning methods for automated diabetic retinopathy screening...", "descriptionType": "Abstract" } ], "conference": { "conferenceName": "AMIA 2025 Annual Symposium", "conferenceLocation": "San Francisco, CA" }, "content": { "sections": [ { "sectionTitle": "Introduction", "sectionContent": "..." }, { "sectionTitle": "Methods", "sectionContent": "..." }, { "sectionTitle": "Results", "sectionContent": "..." }, { "sectionTitle": "Conclusions", "sectionContent": "..." } ] }, "imageCaptions": [ { "caption": "Figure 1. ROC curves showing model performance across datasets" } ], "tableCaptions": [ { "caption": "Table 1. Summary of demographic characteristics" } ], "rightsList": [ { "rights": "Creative Commons Attribution 4.0 International" } ], "formats": ["PDF"] } ``` ### Key Schema Fields (DataCite-based) | Field | Description | |-------|-------------| | `creators` | Authors with name, affiliation, ORCID identifiers | | `titles` | Main title and alternative/translated titles | | `subjects` | Keywords and classification codes (MeSH, LCSH) | | `descriptions` | Abstract, methods, technical information | | `conference` | Conference name, location, dates, URI | | `content.sections` | Extracted poster sections with titles and content | | `imageCaptions` | Figure captions extracted from the poster | | `tableCaptions` | Table captions extracted from the poster | | `fundingReferences` | Grant information (funder, award number) | | `rightsList` | License information (CC-BY, etc.) | | `relatedIdentifiers` | DOIs, URLs to related resources | ## Model Specifications | Attribute | Value | |-----------|-------| | Base Model | meta-llama/Llama-3.1-8B-Instruct | | Parameters | 8 Billion | | Context Length | 128K tokens | | Architecture | LLaMA 3.1 | | Precision | bfloat16 | | License | Llama 3.1 Community License | ## Performance Validated on 10 manually annotated scientific posters: | Metric | Score | Threshold | |--------|-------|-----------| | Word Capture | 0.96 | ≥0.75 | | ROUGE-L | 0.89 | ≥0.75 | | Number Capture | 0.93 | ≥0.75 | | Field Proportion | 0.99 | 0.50–2.00 | **Pass Rate**: 10/10 (100%) ## Direct Usage (Transformers) ```python from transformers import AutoModelForCausalLM, AutoTokenizer model_id = "fairdataihub/Llama-3.1-8B-Poster-Extraction" tokenizer = AutoTokenizer.from_pretrained(model_id) model = AutoModelForCausalLM.from_pretrained( model_id, torch_dtype="auto", device_map="auto" ) prompt = """Extract structured metadata from the following scientific poster. Return valid JSON conforming to the poster-json-schema with fields: creators, titles, publicationYear, subjects, descriptions, conference, content, imageCaptions, tableCaptions. Poster Content: [Your poster text here] """ messages = [{"role": "user", "content": prompt}] inputs = tokenizer.apply_chat_template(messages, return_tensors="pt").to(model.device) outputs = model.generate(inputs, max_new_tokens=4096, temperature=0.1) response = tokenizer.decode(outputs[0], skip_special_tokens=True) print(response) ``` ## System Requirements - **GPU**: NVIDIA CUDA-capable, ≥16GB VRAM (RTX 4090 recommended) - **RAM**: ≥32GB - Supports 8-bit quantization for memory-constrained environments - Compatible with vLLM and other inference optimization frameworks ## Citation ```bibtex @software{poster2json2026, title = {poster2json: Scientific Poster to JSON Metadata Extraction}, author = {O'Neill, James and Soundarajan, Sanjay and Portillo, Dorian and Patel, Bhavesh}, year = {2026}, url = {https://github.com/fairdataihub/poster2json}, doi = {10.5281/zenodo.18320010} } ``` ## License This model is released under the [Llama 3.1 Community License](https://ai.meta.com/llama/license/). ## Acknowledgments - [FAIR Data Innovations Hub](https://fairdataihub.org/) at California Medical Innovations Institute (CalMI²) - [posters.science](https://posters.science) platform - Meta AI for the Llama 3.1 base model - HuggingFace for model hosting infrastructure - Funded by The Navigation Fund ([10.71707/rk36-9x79](https://doi.org/10.71707/rk36-9x79)) — "Poster Sharing and Discovery Made Easy"