commit cf6eba1ff38c6db7f4d9a5e691b42aa7742f02bd Author: ModelHub XC Date: Mon Sep 7 16:56:14 2026 +0800 初始化项目，由ModelHub XC社区提供模型 Model: UCSC-VLAA/MedVLThinker-7B-RL_PMC Source: Original Platform diff --git a/.gitattributes b/.gitattributes new file mode 100644 index 0000000..d2fc868 --- /dev/null +++ b/.gitattributes @@ -0,0 +1,51 @@ +*.7z filter=lfs diff=lfs merge=lfs -text +*.arrow filter=lfs diff=lfs merge=lfs -text +*.bin filter=lfs diff=lfs merge=lfs -text +*.bin.* filter=lfs diff=lfs merge=lfs -text +*.bz2 filter=lfs diff=lfs merge=lfs -text +*.ftz filter=lfs diff=lfs merge=lfs -text +*.gz filter=lfs diff=lfs merge=lfs -text +*.h5 filter=lfs diff=lfs merge=lfs -text +*.joblib filter=lfs diff=lfs merge=lfs -text +*.lfs.* filter=lfs diff=lfs merge=lfs -text +*.model filter=lfs diff=lfs merge=lfs -text +*.msgpack filter=lfs diff=lfs merge=lfs -text +*.onnx filter=lfs diff=lfs merge=lfs -text +*.ot filter=lfs diff=lfs merge=lfs -text +*.parquet filter=lfs diff=lfs merge=lfs -text +*.pb filter=lfs diff=lfs merge=lfs -text +*.pt filter=lfs diff=lfs merge=lfs -text +*.pth filter=lfs diff=lfs merge=lfs -text +*.rar filter=lfs diff=lfs merge=lfs -text +saved_model/**/* filter=lfs diff=lfs merge=lfs -text +*.tar.* filter=lfs diff=lfs merge=lfs -text +*.tflite filter=lfs diff=lfs merge=lfs -text +*.tgz filter=lfs diff=lfs merge=lfs -text +*.xz filter=lfs diff=lfs merge=lfs -text +*.zip filter=lfs diff=lfs merge=lfs -text +*.zstandard filter=lfs diff=lfs merge=lfs -text +*.tfevents* filter=lfs diff=lfs merge=lfs -text +*.db* filter=lfs diff=lfs merge=lfs -text +*.ark* filter=lfs diff=lfs merge=lfs -text +**/*ckpt*data* filter=lfs diff=lfs merge=lfs -text +**/*ckpt*.meta filter=lfs diff=lfs merge=lfs -text +**/*ckpt*.index filter=lfs diff=lfs merge=lfs -text +*.safetensors filter=lfs diff=lfs merge=lfs -text +*.ckpt filter=lfs diff=lfs merge=lfs -text +*.gguf* filter=lfs diff=lfs merge=lfs -text +*.ggml filter=lfs diff=lfs merge=lfs -text +*.llamafile* filter=lfs diff=lfs merge=lfs -text +*.pt2 filter=lfs diff=lfs merge=lfs -text +*.mlmodel filter=lfs diff=lfs merge=lfs -text +*.npy filter=lfs diff=lfs merge=lfs -text +*.npz filter=lfs diff=lfs merge=lfs -text +*.pickle filter=lfs diff=lfs merge=lfs -text +*.pkl filter=lfs diff=lfs merge=lfs -text +*.tar filter=lfs diff=lfs merge=lfs -text +*.wasm filter=lfs diff=lfs merge=lfs -text +*.zst filter=lfs diff=lfs merge=lfs -text +*tfevents* filter=lfs diff=lfs merge=lfs -text + +merges.txt filter=lfs diff=lfs merge=lfs -text +tokenizer.json filter=lfs diff=lfs merge=lfs -text +vocab.json filter=lfs diff=lfs merge=lfs -text \ No newline at end of file diff --git a/README.md b/README.md new file mode 100644 index 0000000..56177f4 --- /dev/null +++ b/README.md @@ -0,0 +1,109 @@ +--- +license: apache-2.0 +base_model: Qwen/Qwen2.5-VL-7B-Instruct +tags: +- vision-language +- medical +- multimodal +- qwen2.5-vl +datasets: +- UCSC-VLAA/MedVLThinker-pmc_vqa-gpt_4o_reasoning-tokenized +- UCSC-VLAA/MedVLThinker-m23k-tokenized +- UCSC-VLAA/MedVLThinker-pmc_vqa +- UCSC-VLAA/MedVLThinker-Eval +language: +- en +pipeline_tag: image-text-to-text +--- + +# MedVLThinker-7B-RL_PMC + +Code: https://github.com/UCSC-VLAA/MedVLThinker +Project Page: https://ucsc-vlaa.github.io/MedVLThinker/ + +## Model Description + +MedVLThinker-7B-RL_PMC is a 7B parameter medical vision-language model based on Qwen2.5-VL. +This model has been trained using reinforcement learning on PMC-VQA dataset. + +## Model Details + +- **Base Model**: Qwen/Qwen2.5-VL-7B-Instruct +- **Model Size**: 7B parameters +- **Training Method**: Reinforcement Learning +- **Training Data**: PMC-VQA dataset + +## Usage + +Check here for demo images: https://github.com/UCSC-VLAA/MedVLThinker?tab=readme-ov-file#demo + +```python +from transformers import Qwen2_5_VLForConditionalGeneration, AutoTokenizer, AutoProcessor +from qwen_vl_utils import process_vision_info +import torch + +# Load the model +model = Qwen2_5_VLForConditionalGeneration.from_pretrained( + "UCSC-VLAA/MedVLThinker-7B-RL_PMC", + torch_dtype=torch.bfloat16, + device_map="auto" +) +processor = AutoProcessor.from_pretrained("UCSC-VLAA/MedVLThinker-7B-RL_PMC") + +# Example usage +messages = [ + { + "role": "system", + "content": "You will solve a problem/request. You should provide your thoughts within tags before providing the answer. Write your final answer within tags.", + }, + { + "role": "user", + "content": [ + { + "type": "image", + "image": "path/to/medical/image.jpg", + }, + {"type": "text", "text": "What can you see in this medical image?"}, + ], + } +] + +# Preparation for inference +text = processor.apply_chat_template( + messages, tokenize=False, add_generation_prompt=True +) +image_inputs, video_inputs = process_vision_info(messages) +inputs = processor( + text=[text], + images=image_inputs, + videos=video_inputs, + padding=True, + return_tensors="pt", +) +inputs = inputs.to("cuda") + +# Inference +generated_ids = model.generate(**inputs, max_new_tokens=2048, temperature=0.6, top_p=0.95, do_sample=True) +generated_ids_trimmed = [ + out_ids[len(in_ids) :] for in_ids, out_ids in zip(inputs.input_ids, generated_ids) +] +output_text = processor.batch_decode( + generated_ids_trimmed, skip_special_tokens=True, clean_up_tokenization_spaces=False +) +print(output_text) +``` + +## Citation + +```bibtex +@article{medvlthinker2025, + title={MedVLThinker: Simple Baselines for Multimodal Medical Reasoning}, + author={Huang, Xiaoke and Wu, Juncheng and Liu, Hui and Tang, Xianfeng and Zhou, Yuyin}, + journal={arXiv preprint}, + year={2025} +} +``` + +## License + +This model is released under the Apache 2.0 license. diff --git a/added_tokens.json b/added_tokens.json new file mode 100644 index 0000000..482ced4 --- /dev/null +++ b/added_tokens.json @@ -0,0 +1,24 @@ +{ + "": 151658, + "": 151657, + "<|box_end|>": 151649, + "<|box_start|>": 151648, + "<|endoftext|>": 151643, + "<|file_sep|>": 151664, + "<|fim_middle|>": 151660, + "<|fim_pad|>": 151662, + "<|fim_prefix|>": 151659, + "<|fim_suffix|>": 151661, + "<|im_end|>": 151645, + "<|im_start|>": 151644, + "<|image_pad|>": 151655, + "<|object_ref_end|>": 151647, + "<|object_ref_start|>": 151646, + "<|quad_end|>": 151651, + "<|quad_start|>": 151650, + "<|repo_name|>": 151663, + "<|video_pad|>": 151656, + "<|vision_end|>": 151653, + 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+ "151645": { + "content": "<|im_end|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151646": { + "content": "<|object_ref_start|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151647": { + "content": "<|object_ref_end|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151648": { + "content": "<|box_start|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151649": { + "content": "<|box_end|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151650": { + "content": "<|quad_start|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151651": { + "content": "<|quad_end|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151652": { + "content": "<|vision_start|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151653": { + "content": "<|vision_end|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151654": { + "content": "<|vision_pad|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151655": { + "content": "<|image_pad|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151656": { + "content": "<|video_pad|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": true + }, + "151657": { + "content": "", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": false + }, + "151658": { + "content": "", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": false + }, + "151659": { + "content": "<|fim_prefix|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": false + }, + "151660": { + "content": "<|fim_middle|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": false + }, + "151661": { + "content": "<|fim_suffix|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": false + }, + "151662": { + "content": "<|fim_pad|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": false + }, + "151663": { + "content": "<|repo_name|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": false + }, + "151664": { + "content": "<|file_sep|>", + "lstrip": false, + "normalized": false, + "rstrip": false, + "single_word": false, + "special": false + } + }, + "additional_special_tokens": [ + "<|im_start|>", + "<|im_end|>", + "<|object_ref_start|>", + "<|object_ref_end|>", + "<|box_start|>", + "<|box_end|>", + "<|quad_start|>", + "<|quad_end|>", + "<|vision_start|>", + "<|vision_end|>", + "<|vision_pad|>", + "<|image_pad|>", + "<|video_pad|>" + ], + "bos_token": null, + "chat_template": "{% set image_count = namespace(value=0) %}{% set video_count = namespace(value=0) %}{% for message in messages %}{% if loop.first and message['role'] != 'system' %}<|im_start|>system\nYou are a helpful assistant.<|im_end|>\n{% endif %}<|im_start|>{{ message['role'] }}\n{% if message['content'] is string %}{{ message['content'] }}<|im_end|>\n{% else %}{% for content in message['content'] %}{% if content['type'] == 'image' or 'image' in content or 'image_url' in content %}{% set image_count.value = image_count.value + 1 %}{% if add_vision_id %}Picture {{ image_count.value }}: {% endif %}<|vision_start|><|image_pad|><|vision_end|>{% elif content['type'] == 'video' or 'video' in content %}{% set video_count.value = video_count.value + 1 %}{% if add_vision_id %}Video {{ video_count.value }}: {% endif %}<|vision_start|><|video_pad|><|vision_end|>{% elif 'text' in content %}{{ content['text'] }}{% endif %}{% endfor %}<|im_end|>\n{% endif %}{% endfor %}{% if add_generation_prompt %}<|im_start|>assistant\n{% endif %}", + "clean_up_tokenization_spaces": false, + "eos_token": "<|im_end|>", + "errors": "replace", + "extra_special_tokens": {}, + "model_max_length": 131072, + "pad_token": "<|endoftext|>", + "processor_class": "Qwen2_5_VLProcessor", + "split_special_tokens": false, + "tokenizer_class": "Qwen2Tokenizer", + "unk_token": null +} diff --git a/vocab.json b/vocab.json new file mode 100644 index 0000000..6c49fc6 --- /dev/null +++ b/vocab.json @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ca10d7e9fb3ed18575dd1e277a2579c16d108e32f27439684afa0e10b1440910 +size 2776833