初始化项目,由ModelHub XC社区提供模型
Model: BiMediX/BiMediX-Bi Source: Original Platform
This commit is contained in:
35
.gitattributes
vendored
Normal file
35
.gitattributes
vendored
Normal file
@@ -0,0 +1,35 @@
|
|||||||
|
*.7z filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.arrow filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.bin filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.bz2 filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.ckpt filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.ftz filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.gz filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.h5 filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.joblib filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.lfs.* filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.mlmodel filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.model filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.msgpack filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.npy filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.npz filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.onnx filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.ot filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.parquet filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.pb filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.pickle filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.pkl filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.pt filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.pth filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.rar filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.safetensors filter=lfs diff=lfs merge=lfs -text
|
||||||
|
saved_model/**/* filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.tar.* filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.tar filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.tflite filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.tgz filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.wasm filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.xz filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.zip filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*.zst filter=lfs diff=lfs merge=lfs -text
|
||||||
|
*tfevents* filter=lfs diff=lfs merge=lfs -text
|
||||||
63
README.md
Normal file
63
README.md
Normal file
@@ -0,0 +1,63 @@
|
|||||||
|
---
|
||||||
|
language:
|
||||||
|
- en
|
||||||
|
- ar
|
||||||
|
metrics:
|
||||||
|
- accuracy
|
||||||
|
pipeline_tag: text-generation
|
||||||
|
tags:
|
||||||
|
- medical
|
||||||
|
license: cc-by-nc-sa-4.0
|
||||||
|
---
|
||||||
|
## Model Card for BiMediX-Bilingual
|
||||||
|
|
||||||
|
### Model Details
|
||||||
|
- **Name:** BiMediX
|
||||||
|
- **Version:** 1.0
|
||||||
|
- **Type:** Bilingual Medical Mixture of Experts Large Language Model (LLM)
|
||||||
|
- **Languages:** English, Arabic
|
||||||
|
- **Model Architecture:** [Mixtral-8x7B-Instruct-v0.1](https://huggingface.co/mistralai/Mixtral-8x7B-Instruct-v0.1)
|
||||||
|
- **Training Data:** BiMed1.3M, a bilingual dataset with diverse medical interactions.
|
||||||
|
|
||||||
|
### Intended Use
|
||||||
|
- **Primary Use:** Medical interactions in both English and Arabic.
|
||||||
|
- **Capabilities:** MCQA, closed QA and chats.
|
||||||
|
|
||||||
|
## Getting Started
|
||||||
|
|
||||||
|
```python
|
||||||
|
from transformers import AutoModelForCausalLM, AutoTokenizer
|
||||||
|
model_id = "BiMediX/BiMediX-Bi"
|
||||||
|
tokenizer = AutoTokenizer.from_pretrained(model_id)
|
||||||
|
model = AutoModelForCausalLM.from_pretrained(model_id)
|
||||||
|
text = "Hello BiMediX! I've been experiencing increased tiredness in the past week."
|
||||||
|
inputs = tokenizer(text, return_tensors="pt")
|
||||||
|
outputs = model.generate(**inputs, max_new_tokens=500)
|
||||||
|
print(tokenizer.decode(outputs[0], skip_special_tokens=True))
|
||||||
|
```
|
||||||
|
|
||||||
|
### Training Procedure
|
||||||
|
- **Dataset:** BiMed1.3M, 632 million healthcare specialized tokens.
|
||||||
|
- **QLoRA Adaptation:** Implements a low-rank adaptation technique, incorporating learnable low-rank adapter weights into the experts and the routing network. This results in training about 4% of the original parameters.
|
||||||
|
- **Training Resources:** The model underwent training on approximately 632 million tokens from the Arabic-English corpus, including 288 million tokens exclusively for English.
|
||||||
|
|
||||||
|
### Model Performance
|
||||||
|
- **Benchmarks:** Outperforms the baseline model and Jais-30B in medical evaluations.
|
||||||
|
|
||||||
|
| **Model** | **CKG** | **CBio** | **CMed** | **MedGen** | **ProMed** | **Ana** | **MedMCQA** | **MedQA** | **PubmedQA** | **AVG** |
|
||||||
|
|-----------------------------------|------------|-----------|-----------|-------------|-------------|---------|-------------|-----------|--------------|---------|
|
||||||
|
| Jais-30B | 57.4 | 55.2 | 46.2 | 55.0 | 46.0 | 48.9 | 40.2 | 31.0 | 75.5 | 50.6 |
|
||||||
|
| Mixtral-8x7B| 59.1 | 57.6 | 52.6 | 59.5 | 53.3 | 54.4 | 43.2 | 40.6 | 74.7 | 55.0 |
|
||||||
|
| **BiMediX (Bilingual)** | **70.6** | **72.2** | **59.3** | **74.0** | **64.2** | **59.6**| **55.8** | **54.0** | **78.6** | **65.4**|
|
||||||
|
|
||||||
|
### Safety and Ethical Considerations
|
||||||
|
- **Potential issues**: hallucinations, toxicity, stereotypes.
|
||||||
|
- **Usage:** Research purposes only.
|
||||||
|
|
||||||
|
### Accessibility
|
||||||
|
- **Availability:** [BiMediX GitHub Repository](https://github.com/mbzuai-oryx/BiMediX).
|
||||||
|
- arxiv.org/abs/2402.13253
|
||||||
|
|
||||||
|
### Authors
|
||||||
|
Sara Pieri, Sahal Shaji Mullappilly, Fahad Shahbaz Khan, Rao Muhammad Anwer Salman Khan, Timothy Baldwin, Hisham Cholakkal
|
||||||
|
**Mohamed Bin Zayed University of Artificial Intelligence (MBZUAI)**
|
||||||
30
config.json
Normal file
30
config.json
Normal file
@@ -0,0 +1,30 @@
|
|||||||
|
{
|
||||||
|
"_name_or_path": "mistralai/Mixtral-8x7B-v0.1",
|
||||||
|
"architectures": [
|
||||||
|
"MixtralForCausalLM"
|
||||||
|
],
|
||||||
|
"attention_dropout": 0.0,
|
||||||
|
"bos_token_id": 1,
|
||||||
|
"eos_token_id": 2,
|
||||||
|
"hidden_act": "silu",
|
||||||
|
"hidden_size": 4096,
|
||||||
|
"initializer_range": 0.02,
|
||||||
|
"intermediate_size": 14336,
|
||||||
|
"max_position_embeddings": 32768,
|
||||||
|
"model_type": "mixtral",
|
||||||
|
"num_attention_heads": 32,
|
||||||
|
"num_experts_per_tok": 2,
|
||||||
|
"num_hidden_layers": 32,
|
||||||
|
"num_key_value_heads": 8,
|
||||||
|
"num_local_experts": 8,
|
||||||
|
"output_router_logits": true,
|
||||||
|
"rms_norm_eps": 1e-05,
|
||||||
|
"rope_theta": 1000000.0,
|
||||||
|
"router_aux_loss_coef": 0.02,
|
||||||
|
"sliding_window": null,
|
||||||
|
"tie_word_embeddings": false,
|
||||||
|
"torch_dtype": "bfloat16",
|
||||||
|
"transformers_version": "4.37.0",
|
||||||
|
"use_cache": false,
|
||||||
|
"vocab_size": 32000
|
||||||
|
}
|
||||||
7
generation_config.json
Normal file
7
generation_config.json
Normal file
@@ -0,0 +1,7 @@
|
|||||||
|
{
|
||||||
|
"_from_model_config": true,
|
||||||
|
"bos_token_id": 1,
|
||||||
|
"do_sample": true,
|
||||||
|
"eos_token_id": 2,
|
||||||
|
"transformers_version": "4.37.0"
|
||||||
|
}
|
||||||
3
pytorch_model-00001-of-00019.bin
Normal file
3
pytorch_model-00001-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:8ad342adb98aed82bdc4d5604d0c8a06b4095865f3c24072289beebb9a25a1df
|
||||||
|
size 4892821288
|
||||||
3
pytorch_model-00002-of-00019.bin
Normal file
3
pytorch_model-00002-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:eb252da0231413672844511d6af7eefc0452497eb2d9946995fe7704f7c13045
|
||||||
|
size 4983016612
|
||||||
3
pytorch_model-00003-of-00019.bin
Normal file
3
pytorch_model-00003-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:d6cadd1c4c0d3117f7743f2b7e08f280f11a5c5a712fb881f1a0953c8d18e1cb
|
||||||
|
size 4983016696
|
||||||
3
pytorch_model-00004-of-00019.bin
Normal file
3
pytorch_model-00004-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:a999124b374a5f16aadc6662f32c1d7c8a7bc8c958742f7dca071499ac1df176
|
||||||
|
size 4899046246
|
||||||
3
pytorch_model-00005-of-00019.bin
Normal file
3
pytorch_model-00005-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:9beedfe055724d09a83d28131aa14f9bc8bb61c93658ce7e90d1654c60f0e509
|
||||||
|
size 4983016648
|
||||||
3
pytorch_model-00006-of-00019.bin
Normal file
3
pytorch_model-00006-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:efb1318c0ad27b559de333c07254ec269f81fbe87d47e7df9c13e8b557634b94
|
||||||
|
size 4983016612
|
||||||
3
pytorch_model-00007-of-00019.bin
Normal file
3
pytorch_model-00007-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:376d6839cbe1cb9cea919415c97fba86f51d85bb68bc21d103df069e81e391d5
|
||||||
|
size 4899046246
|
||||||
3
pytorch_model-00008-of-00019.bin
Normal file
3
pytorch_model-00008-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:9ede8207345703b2404c001ce72d0bca982271a49187d658433681edfa8fdec5
|
||||||
|
size 4983016736
|
||||||
3
pytorch_model-00009-of-00019.bin
Normal file
3
pytorch_model-00009-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:65908e7b7d7ce29052a6f4b3e8446f6389eaad8f51351afdf89332bf362a245b
|
||||||
|
size 4983016676
|
||||||
3
pytorch_model-00010-of-00019.bin
Normal file
3
pytorch_model-00010-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:ca2f12fbc6ee652d1eed0d42068b81503d645c2afe9daceafc7fb28c842de0fd
|
||||||
|
size 4899046246
|
||||||
3
pytorch_model-00011-of-00019.bin
Normal file
3
pytorch_model-00011-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:a635716855d8aa972526333aa32b00618f36edad50e797f793ddaab827321691
|
||||||
|
size 4983016700
|
||||||
3
pytorch_model-00012-of-00019.bin
Normal file
3
pytorch_model-00012-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:828d358f058c95a3ab8ee96d8a689136b90095c2066b6684de9244964041b8b9
|
||||||
|
size 4983016700
|
||||||
3
pytorch_model-00013-of-00019.bin
Normal file
3
pytorch_model-00013-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:fb610d40e391928cf9278d0b7d444770c7953db2b08544df53d8ec754b020de3
|
||||||
|
size 4983016676
|
||||||
3
pytorch_model-00014-of-00019.bin
Normal file
3
pytorch_model-00014-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:e61bd5453685b3410500e360ce5de691a6b7ee6e6cf41c6528f424e7d8a0692b
|
||||||
|
size 4899046246
|
||||||
3
pytorch_model-00015-of-00019.bin
Normal file
3
pytorch_model-00015-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:762687faff8d43ae482dab2bcc2f645921bfe5ec0b99c7bf81424649e292043e
|
||||||
|
size 4983016736
|
||||||
3
pytorch_model-00016-of-00019.bin
Normal file
3
pytorch_model-00016-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:9b036f338812e3ff3e8c73f9c9106af3e95bcd7c024532a21da255a03c9ab508
|
||||||
|
size 4983016676
|
||||||
3
pytorch_model-00017-of-00019.bin
Normal file
3
pytorch_model-00017-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:45df28159bdfafb0aa3137a9bb379f7d761c4b0edd65efe6eca8bf418bc7959d
|
||||||
|
size 4899046246
|
||||||
3
pytorch_model-00018-of-00019.bin
Normal file
3
pytorch_model-00018-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:a60bb42ddb8ac954aeff7b16b40c3e6a1251299d1b8a6c66004b8b22105078f4
|
||||||
|
size 4983016712
|
||||||
3
pytorch_model-00019-of-00019.bin
Normal file
3
pytorch_model-00019-of-00019.bin
Normal file
@@ -0,0 +1,3 @@
|
|||||||
|
version https://git-lfs.github.com/spec/v1
|
||||||
|
oid sha256:ba088f5a08a3ad6f73ecfe678a3e82e3c0dbc064dc80a4993fabb0782b72e8f1
|
||||||
|
size 4221689154
|
||||||
1002
pytorch_model.bin.index.json
Normal file
1002
pytorch_model.bin.index.json
Normal file
File diff suppressed because it is too large
Load Diff
24
special_tokens_map.json
Normal file
24
special_tokens_map.json
Normal file
@@ -0,0 +1,24 @@
|
|||||||
|
{
|
||||||
|
"bos_token": {
|
||||||
|
"content": "<s>",
|
||||||
|
"lstrip": false,
|
||||||
|
"normalized": false,
|
||||||
|
"rstrip": false,
|
||||||
|
"single_word": false
|
||||||
|
},
|
||||||
|
"eos_token": {
|
||||||
|
"content": "</s>",
|
||||||
|
"lstrip": false,
|
||||||
|
"normalized": false,
|
||||||
|
"rstrip": false,
|
||||||
|
"single_word": false
|
||||||
|
},
|
||||||
|
"pad_token": "</s>",
|
||||||
|
"unk_token": {
|
||||||
|
"content": "<unk>",
|
||||||
|
"lstrip": false,
|
||||||
|
"normalized": false,
|
||||||
|
"rstrip": false,
|
||||||
|
"single_word": false
|
||||||
|
}
|
||||||
|
}
|
||||||
BIN
tokenizer.model
(Stored with Git LFS)
Normal file
BIN
tokenizer.model
(Stored with Git LFS)
Normal file
Binary file not shown.
45
tokenizer_config.json
Normal file
45
tokenizer_config.json
Normal file
@@ -0,0 +1,45 @@
|
|||||||
|
{
|
||||||
|
"add_bos_token": true,
|
||||||
|
"add_eos_token": false,
|
||||||
|
"added_tokens_decoder": {
|
||||||
|
"0": {
|
||||||
|
"content": "<unk>",
|
||||||
|
"lstrip": false,
|
||||||
|
"normalized": false,
|
||||||
|
"rstrip": false,
|
||||||
|
"single_word": false,
|
||||||
|
"special": true
|
||||||
|
},
|
||||||
|
"1": {
|
||||||
|
"content": "<s>",
|
||||||
|
"lstrip": false,
|
||||||
|
"normalized": false,
|
||||||
|
"rstrip": false,
|
||||||
|
"single_word": false,
|
||||||
|
"special": true
|
||||||
|
},
|
||||||
|
"2": {
|
||||||
|
"content": "</s>",
|
||||||
|
"lstrip": false,
|
||||||
|
"normalized": false,
|
||||||
|
"rstrip": false,
|
||||||
|
"single_word": false,
|
||||||
|
"special": true
|
||||||
|
}
|
||||||
|
},
|
||||||
|
"additional_special_tokens": [],
|
||||||
|
"bos_token": "<s>",
|
||||||
|
"chat_template": "{{ bos_token }}{% for message in messages %}{% if (message['role'] == 'user') != (loop.index0 % 2 == 0) %}{{ raise_exception('Conversation roles must alternate user/assistant/user/assistant/...') }}{% endif %}{% if message['role'] == 'user' %}{{ '[INST] ' + message['content'] + ' [/INST]' }}{% elif message['role'] == 'assistant' %}{{ message['content'] + eos_token}}{% else %}{{ raise_exception('Only user and assistant roles are supported!') }}{% endif %}{% endfor %}",
|
||||||
|
"clean_up_tokenization_spaces": false,
|
||||||
|
"eos_token": "</s>",
|
||||||
|
"legacy": true,
|
||||||
|
"model_max_length": 1000000000000000019884624838656,
|
||||||
|
"pad_token": "</s>",
|
||||||
|
"sp_model_kwargs": {},
|
||||||
|
"spaces_between_special_tokens": false,
|
||||||
|
"tokenizer_class": "LlamaTokenizer",
|
||||||
|
"trust_remote_code": true,
|
||||||
|
"unk_token": "<unk>",
|
||||||
|
"use_default_system_prompt": false,
|
||||||
|
"use_fast": true
|
||||||
|
}
|
||||||
Reference in New Issue
Block a user